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Jia-Yu Chen
Jia-Yu Chen
PKU, UCSD, NJU
Verified email at nju.edu.cn
Title
Cited by
Cited by
Year
Expanded encyclopaedias of DNA elements in the human and mouse genomes
The ENCODE Project Consortium
Nature 583 (7818), 699-710, 2020
12762020
A large-scale binding and functional map of human RNA-binding proteins
EL Van Nostrand*, P Freese*, GA Pratt*, X Wang*, X Wei*, R Xiao*, ...
Nature 583 (7818), 711-719, 2020
8092020
R-ChIP Using Inactive RNase H Reveals Dynamic Coupling of R-loops with Transcriptional Pausing at Gene Promoters
L Chen*, JY Chen*, X Zhang, Y Gu, R Xiao, C Shao, P Tang, H Qian, ...
Molecular Cell, 2017
3082017
The Augmented R-Loop Is a Unifying Mechanism for Myelodysplastic Syndromes Induced by High-Risk Splicing Factor Mutations
L Chen*, JY Chen*, YJ Huang*, Y Gu, J Qiu, H Qian, C Shao, X Zhang, ...
Molecular Cell, 2018
2512018
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription
R Xiao*, JY Chen*, Z Liang*, D Luo, G Chen, ZJ Lu, Y Chen, B Zhou, H Li, ...
Cell 178 (1), 107-121. e18, 2019
2502019
Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs
C Xie*, YE Zhang*, JY Chen*, CJ Liu, WZ Zhou, Y Li, M Zhang, R Zhang, ...
PLoS Genetics 8 (9), e1002942, 2012
1632012
Perspectives on ENCODE
The ENCODE Project Consortium
Nature 583 (7818), 693-698, 2020
92*2020
RNA editome in rhesus macaque shaped by purifying selection
JY Chen*, Z Peng*, R Zhang*, XZ Yang, BCM Tan, H Fang, CJ Liu, M Shi, ...
PLoS genet 10 (4), e1004274, 2014
862014
R-ChIP for genome-wide mapping of R-loops by using catalytically inactive RNASEH1
JY Chen, X Zhang, XD Fu^, L Chen^
Nature protocols 14 (5), 1661-1685, 2019
622019
Emergence, retention and selection: a trilogy of origination for functional de novo proteins from ancestral LncRNAs in primates
JY Chen*, QS Shen*, WZ Zhou*, J Peng, BZ He, Y Li, CJ Liu, X Luan, ...
PLoS genetics 11 (7), e1005391, 2015
582015
Spliceosomal protein eftud2 mutation leads to p53-dependent apoptosis in zebrafish neural progenitors
L Lei*, SY Yan*, R Yang, JY Chen, Y Li, Y Bu, N Chang, Q Zhou, X Zhu, ...
Nucleic acids research 45 (6), 3422-3436, 2017
562017
Nexilin is a new component of junctional membrane complexes required for cardiac T-tubule formation
C Liu*, S Spinozzi*, JY Chen, X Fang, W Feng, G Perkins, P Cattaneo, ...
Circulation 140 (1), 55-66, 2019
482019
Isoform evolution in primates through independent combination of alternative RNA processing events
SJ Zhang*, C Wang*, S Yan*, A Fu, X Luan, Y Li, Q Sunny Shen, X Zhong, ...
Molecular biology and evolution 34 (10), 2453-2468, 2017
392017
Evolutionary interrogation of human biology in well-annotated genomic framework of rhesus macaque
SJ Zhang*, CJ Liu*, P Yu*, X Zhong, JY Chen, X Yang, J Peng, S Yan, ...
Molecular biology and evolution 31 (5), 1309-1324, 2014
392014
An RNA-cleaving threose nucleic acid enzyme capable of single point mutation discrimination
Y Wang*, Y Wang*, D Song, X Sun, Z Li^, JY Chen, H Yu^
Nature Chemistry 14 (3), 350-359, 2022
362022
RhesusBase: a knowledgebase for the monkey research community
SJ Zhang*, CJ Liu*, M Shi*, L Kong, JY Chen, WZ Zhou, X Zhu, P Yu, ...
Nucleic Acids Research, 2012
362012
De novo genes with an lncRNA origin encode unique human brain developmental functionality
NA An, J Zhang, F Mo, X Luan, L Tian, QS Shen, X Li, C Li, F Zhou, ...
Nature ecology & evolution 7 (2), 264-278, 2023
302023
Cockayne syndrome B protein acts as an ATP-dependent processivity factor that helps RNA polymerase II overcome nucleosome barriers
J Xu, W Wang, L Xu, JY Chen, J Chong, J Oh, AE Leschziner, XD Fu, ...
Proceedings of the National Academy of Sciences 117 (41), 25486-25493, 2020
302020
R-loopBase: a knowledgebase for genome-wide R-loop formation and regulation
R Lin*, X Zhong*^, Y Zhou*, H Geng, Q Hu, Z Huang, J Hu, XD Fu, ...
Nucleic Acids Research, 2021
262021
c-Myc-targeting PROTAC based on a TNA-DNA bivalent binder for combination therapy of triple-negative breast cancer
X Li, Z Zhang, F Gao, Y Ma, D Wei, Z Lu, S Chen, M Wang, Y Wang, K Xu, ...
Journal of the American Chemical Society 145 (16), 9334-9342, 2023
252023
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