| Genetic perturbation of the maize methylome Q Li, SR Eichten, PJ Hermanson, VM Zaunbrecher, J Song, J Wendt, ... The Plant Cell 26 (12), 4602-4616, 2014 | 174 | 2014 |
| Construction and optimization of a large gene coexpression network in maize using RNA-Seq data J Huang, S Vendramin, L Shi, KM McGinnis Plant physiology 175 (1), 568-583, 2017 | 57 | 2017 |
| Distinct tissue-specific transcriptional regulation revealed by gene regulatory networks in maize J Huang, J Zheng, H Yuan, K McGinnis BMC plant biology 18, 1-14, 2018 | 49 | 2018 |
| Evolutionarily informed machine learning enhances the power of predictive gene-to-phenotype relationships CY Cheng, Y Li, K Varala, J Bubert, J Huang, GJ Kim, J Halim, J Arp, ... Nature communications 12 (1), 5627, 2021 | 48 | 2021 |
| HY5 contributes to light-regulated root system architecture under a root-covered culture system Y Zhang, C Wang, H Xu, X Shi, W Zhen, Z Hu, J Huang, Y Zheng, ... Frontiers in Plant Science 10, 1490, 2019 | 36 | 2019 |
| ConnecTF: A platform to integrate transcription factor–gene interactions and validate regulatory networks MD Brooks, CL Juang, MS Katari, JM Alvarez, A Pasquino, HJ Shih, ... Plant physiology 185 (1), 49-66, 2021 | 34 | 2021 |
| Chromatin structure and gene expression changes associated with loss of MOP1 activity in Zea mays TF Madzima, J Huang, KM McGinnis Epigenetics 9 (7), 1047-1059, 2014 | 26 | 2014 |
| Epigenetic regulation of ABA-induced transcriptional responses in maize S Vendramin, J Huang, PA Crisp, TF Madzima, KM McGinnis G3: Genes, Genomes, Genetics 10 (5), 1727-1743, 2020 | 24 | 2020 |
| Epigenetic control of gene expression in maize J Huang, JS Lynn, L Schulte, S Vendramin, K McGinnis International review of cell and molecular biology 328, 25-48, 2017 | 20 | 2017 |
| Functional interplay of histone lysine 2-hydroxyisobutyrylation and acetylation in Arabidopsis under dark-induced starvation L Zheng, C Li, X Ma, H Zhou, Y Liu, P Wang, H Yang, Y Tamada, J Huang, ... Nucleic Acids Research 49 (13), 7347-7360, 2021 | 13 | 2021 |
| Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice CM Shanks, J Huang, CY Cheng, HJS Shih, MD Brooks, JM Alvarez, ... Frontiers in plant science 13, 1006044, 2022 | 4 | 2022 |
| Building High-Confidence Gene Regulatory Networks by Integrating Validated TF–Target Gene Interactions Using ConnecTF J Huang, MS Katari, CL Juang, GM Coruzzi, MD Brooks Plant Gene Regulatory Networks: Methods and Protocols, 195-220, 2023 | | 2023 |
| Characterizing Gene Networks and RNA-Mediated Gene Regulation in Maize J Huang The Florida State University, 2018 | | 2018 |
| Epigenetic Regulation of Gene Expression in Maize. KM Mcginnis, L Stroud, J Huang, T Madzima, J Lynn, S Vendramin, ... IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL 52, S26-S26, 2016 | | 2016 |
