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Onur Erbilgin
Onur Erbilgin
Verified email at lbl.gov - Homepage
Title
Cited by
Cited by
Year
A taxonomy of bacterial microcompartment loci constructed by a novel scoring method
SD Axen, O Erbilgin, CA Kerfeld
PLoS computational biology 10 (10), e1003898, 2014
2402014
Bacterial microcompartments and the modular construction of microbial metabolism
CA Kerfeld, O Erbilgin
Trends in microbiology 23 (1), 22-34, 2015
1752015
Characterization of a planctomycetal organelle: a novel bacterial microcompartment for the aerobic degradation of plant saccharides
O Erbilgin, KL McDonald, CA Kerfeld
Applied and environmental microbiology 80 (7), 2193-2205, 2014
1292014
Glyoxylate metabolism is a key feature of the metabolic degradation of 1, 4-dioxane by Pseudonocardia dioxanivorans strain CB1190
A Grostern, CM Sales, WQ Zhuang, O Erbilgin, L Alvarez-Cohen
Applied and environmental microbiology 78 (9), 3298-3308, 2012
1122012
Bacterial microcompartment assembly: The key role of encapsulation peptides
C Aussignargues, BC Paasch, R Gonzalez-Esquer, O Erbilgin, CA Kerfeld
Communicative & integrative biology 8 (3), e1039755, 2015
892015
Bioinformatic characterization of glycyl radical enzyme-associated bacterial microcompartments
J Zarzycki, O Erbilgin, CA Kerfeld
Applied and environmental microbiology 81 (24), 8315-8329, 2015
582015
The structural basis of coenzyme A recycling in a bacterial organelle
O Erbilgin, M Sutter, CA Kerfeld
PLoS biology 14 (3), e1002399, 2016
402016
Dynamic substrate preferences predict metabolic properties of a simple microbial consortium
O Erbilgin, BP Bowen, SM Kosina, S Jenkins, RK Lau, TR Northen
BMC bioinformatics 18, 1-12, 2017
302017
MAGI: a method for metabolite annotation and gene integration
O Erbilgin, O Rübel, KB Louie, M Trinh, M Raad, T Wildish, D Udwary, ...
ACS chemical biology 14 (4), 704-714, 2019
282019
Bacterial microcompartment assembly: the key role of encapsulation peptides. Commun Integr Biol 8: e1039755
C Aussignargues, BC Paasch, R Gonzalez-Esquer, O Erbilgin, CA Kerfeld
72015
An automated scientist to design and optimize microbial strains for the industrial production of small molecules
AH Singh, BB Kaufmann-Malaga, JA Lerman, DP Dougherty, Y Zhang, ...
bioRxiv, 2023.01. 03.521657, 2023
42023
Metabolite, annotation, and gene integration system and method
O Erbilgin, BP Bowen, TR Northen, DE Markus, O Ruebel
US Patent App. 15/932,459, 2018
22018
Automated Biochemical Reaction Coder (Reactionizer) v1
BP Bowen, O Erbilgin
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States), 2018
2018
Metabolites Annotations and Genes Integrated (MAGI) v1. 0
B Bowen, O Erbilgin, O Ruebel
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States), 2017
2017
Predicting Coculture Substrate Depletion (PCSD) v1
B Bowen, O Erbilgin
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States), 2017
2017
A Journey to the Center of a Bacterial Organelle
O Erbilgin
University of California, Berkeley, 2015
2015
Characterization of a Planctomycetal
O Erbilgin, KL McDonald, CA Kerfeld
2014
Analysis of gene expression in Pseudonocardia dioxanivorans strain CB1190 during growth with dioxane, glycolate or pyruvate
A Grostern, CM Sales, WQ Zhuang, O Erbilgin, L Alvarez-Cohen
2012
Author Contributions 15
O Erbilgin, O Rübel, KB Louie, M Trinh, M de Raad
Metabolomics 22, 23, 0
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Articles 1–19