| Development and genetic mapping of microsatellite markers from whole genome shotgun sequences in Brassica oleracea H Li, X Chen, Y Yang, J Xu, J Gu, J Fu, X Qian, S Zhang, J Wu, K Liu Molecular Breeding 28, 585-596, 2011 | 83 | 2011 |
| A CACTA‐like transposable element in the upstream region of BnaA9.CYP78A9 acts as an enhancer to increase silique length and seed weight in rapeseed L Shi, J Song, C Guo, B Wang, Z Guan, P Yang, X Chen, Q Zhang, ... The Plant Journal 98 (3), 524-539, 2019 | 78 | 2019 |
| Genome-wide DNA methylation profiling by modified reduced representation bisulfite sequencing in Brassica rapa suggests that epigenetic modifications play a … X Chen, X Ge, J Wang, C Tan, GJ King, K Liu Frontiers in plant science 6, 836, 2015 | 60 | 2015 |
| Detection and genotyping of restriction fragment associated polymorphisms in polyploid crops with a pseudo-reference sequence: a case study in allotetraploid Brassica napus X Chen, X Li, B Zhang, J Xu, Z Wu, B Wang, H Li, M Younas, L Huang, ... BMC genomics 14, 1-12, 2013 | 59 | 2013 |
| A virome-wide clonal integration analysis platform for discovering cancer viral etiology X Chen, J Kost, A Sulovari, N Wong, WS Liang, J Cao, D Li Genome research 29 (5), 819-830, 2019 | 49 | 2019 |
| Evaluation of Linkage Disequilibrium Pattern and Association Study on Seed Oil Content in Brassica napus Using ddRAD Sequencing Z Wu, B Wang, X Chen, J Wu, GJ King, Y Xiao, K Liu PLoS One 11 (1), e0146383, 2016 | 48 | 2016 |
| Development of a core set of single-locus SSR markers for allotetraploid rapeseed (Brassica napus L.) H Li, M Younas, X Wang, X Li, L Chen, B Zhao, X Chen, J Xu, F Hou, ... Theoretical and Applied Genetics 126, 937-947, 2013 | 47 | 2013 |
| The Arabidopsis RETARDED ROOT GROWTH Gene Encodes a Mitochondria-Localized Protein That Is Required for Cell Division in the Root Meristem X Zhou, Q Li, X Chen, J Liu, Q Zhang, Y Liu, K Liu, J Xu Plant Physiology 157 (4), 1793-1804, 2011 | 35 | 2011 |
| Comprehensive comparative analysis of methods and software for identifying viral integrations X Chen, J Kost, D Li Briefings in bioinformatics 20 (6), 2088-2097, 2019 | 28 | 2019 |
| ERVcaller: identifying polymorphic endogenous retrovirus and other transposable element insertions using whole-genome sequencing data X Chen, D Li Bioinformatics 35 (20), 3913-3922, 2019 | 26 | 2019 |
| QTL scanning for rice yield using a whole genome SNP array C Tan, Z Han, H Yu, W Zhan, W Xie, X Chen, H Zhao, F Zhou, Y Xing Journal of genetics and genomics 40 (12), 629-638, 2013 | 26 | 2013 |
| Abundance, marker development and genetic mapping of microsatellites from unigenes in Brassica napus F Wang, X Wang, X Chen, Y Xiao, H Li, S Zhang, J Xu, J Fu, L Huang, ... Molecular breeding 30, 731-744, 2012 | 24 | 2012 |
| Transposable elements are associated with the variable response to influenza infection X Chen, A Pacis, KA Aracena, S Gona, T Kwan, C Groza, YL Lin, ... Cell Genomics 3 (5), 2023 | 8 | 2023 |
| A comprehensive and precise set of intervarietal substitution lines to identify candidate genes and quantitative trait loci in oilseed rape (Brassica napus L.) S Yang, B Zhang, G Liu, B Hong, J Xu, X Chen, B Wang, Z Wu, F Hou, ... Theoretical and applied genetics 131, 2117-2129, 2018 | 8 | 2018 |
| Genome graphs detect human polymorphisms in active epigenomic state during influenza infection C Groza, X Chen, A Pacis, MM Simon, A Pramatarova, KA Aracena, ... Cell Genomics 3 (5), 2023 | 7 | 2023 |
| Characterization of Hepatitis B Virus Integrations Identified in Hepatocellular Carcinoma Genomes PP Mathkar, X Chen#, A Sulovari, D Li# Viruses 13 (2), 245, 2021 | 6 | 2021 |
| Sequencing facility and DNA source associated patterns of virus-mappable reads in whole-genome sequencing data X Chen, D Li Genomics 113 (1), 1189-1198, 2021 | 6 | 2021 |
| Genetic diversity comparison between spring and weak-winter Brassica napus cultivars using single-locus SSR markers X CHEN, J WU, K LIU | 6* | 2010 |
| Epigenetic variation impacts ancestry-associated differences in the transcriptional response to influenza infection KA Aracena, YL Lin, K Luo, A Pacis, S Gona, Z Mu, V Yotova, R Sindeaux, ... bioRxiv, 2022.05. 10.491413, 2022 | 5 | 2022 |
| Epigenetic variation impacts individual differences in the transcriptional response to influenza infection KA Aracena, YL Lin, K Luo, A Pacis, S Gona, Z Mu, V Yotova, R Sindeaux, ... Nature Genetics, 1-12, 2024 | 2 | 2024 |
