| Distinct patterns of blood cytokines beyond a cytokine storm predict mortality in COVID-19 C Herr, S Mang, B Mozafari, K Guenther, T Speer, M Seibert, ... Journal of inflammation research, 4651-4667, 2021 | 33 | 2021 |
| A hydrogel-based in vitro assay for the fast prediction of antibiotic accumulation in Gram-negative bacteria R Richter, MAM Kamal, MA García-Rivera, J Kaspar, M Junk, ... Materials Today Bio 8, 100084, 2020 | 18 | 2020 |
| MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants SK Srikakulam, S Keller, F Dabbaghie, R Bals, OV Kalinina Bioinformatics 39 (3), btad101, 2023 | 11* | 2023 |
| Exploring the conformational landscapes of HIV protease structural ensembles using principal component analysis S Hassan, SK Srikakulam, Y Chandramohan, M Thangam, S Muthukumar, ... Proteins: Structure, Function, and Bioinformatics 86 (9), 990-1000, 2018 | 5 | 2018 |
| d-StructMAn: Containerized structural annotation on the scale from genetic variants to whole proteomes A Gress, SK Srikakulam, S Keller, V Ramensky, OV Kalinina GigaScience 11, giac086, 2022 | 2 | 2022 |
| Epistatic interactions promote persistence of NS3-Q80K in HCV infection by compensating for protein folding instability G Dultz, SK Srikakulam, M Konetschnik, T Shimakami, NT Doncheva, ... Journal of biological chemistry 297 (3), 2021 | 2 | 2021 |
| The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update Nucleic Acids Research, gkae410, 2024 | 1 | 2024 |
| PanPA: generation and alignment of panproteome graphs F Dabbaghie, SK Srikakulam, T Marschall, OV Kalinina Bioinformatics Advances 3 (1), vbad167, 2023 | 1 | 2023 |
| Conda, Container and Bots: How to Build and Maintain Tool Dependencies in Workflows and Training Materials P Zierep, SK Srikakulam, S Schaaf, B Grüning Proceedings of the Conference on Research Data Infrastructure 1, 2023 | | 2023 |
| Interactive Tools (IT) in Galaxy: Combining Synchronous and Asynchronous Workflows T Kayikcioglu, SK Srikakulam, W Maier, B Grüning Proceedings of the Conference on Research Data Infrastructure 1, 2023 | | 2023 |
| A shift of dynamic equilibrium between the KIT active and inactive states causes drug resistance SK Srikakulam, T Bastys, OV Kalinina Proteins: Structure, Function, and Bioinformatics 88 (11), 1434-1446, 2020 | | 2020 |
| Interactive Tools (IT) in Galaxy T Kayikcioglu, SK Srikakulam | | |
