| Transfer learning in biomedical natural language processing: an evaluation of BERT and ELMo on ten benchmarking datasets Y Peng, S Yan, Z Lu arXiv preprint arXiv:1906.05474, 2019 | 876 | 2019 |
| Verbal aggression detection on Twitter comments: Convolutional neural network for short-text sentiment analysis J Chen, S Yan, KC Wong Neural Computing and Applications 32, 10809-10818, 2020 | 97 | 2020 |
| Artificial intelligence in action: addressing the COVID-19 pandemic with natural language processing Q Chen, R Leaman, A Allot, L Luo, CH Wei, S Yan, Z Lu Annual review of biomedical data science 4, 313-339, 2021 | 65 | 2021 |
| BioConceptVec: creating and evaluating literature-based biomedical concept embeddings on a large scale Q Chen, K Lee, S Yan, S Kim, CH Wei, Z Lu PLoS computational biology 16 (4), e1007617, 2020 | 47 | 2020 |
| PhenoTagger: a hybrid method for phenotype concept recognition using human phenotype ontology L Luo, S Yan, PT Lai, D Veltri, A Oler, S Xirasagar, R Ghosh, M Similuk, ... Bioinformatics 37 (13), 1884-1890, 2021 | 32 | 2021 |
| Transfer learning in biomedical natural language processing: An evaluation of BERT and ELMo on ten benchmarking datasets. arXiv 2019 Y Peng, S Yan, Z Lu arXiv preprint arXiv:1906.05474, 1906 | 26 | 1906 |
| Context awareness and embedding for biomedical event extraction S Yan, KC Wong Bioinformatics 36 (2), 637-643, 2020 | 18 | 2020 |
| Early cancer detection from multianalyte blood test results KC Wong, J Chen, J Zhang, J Lin, S Yan, S Zhang, X Li, C Liang, C Peng, ... Iscience 15, 332-341, 2019 | 17 | 2019 |
| DNA sequencing technologies: sequencing data protocols and bioinformatics tools KC Wong, J Zhang, S Yan, X Li, Q Lin, S Kwong, C Liang ACM Computing Surveys (CSUR) 52 (5), 1-30, 2019 | 15 | 2019 |
| Proceedings of the 18th BioNLP Workshop and Shared Task Y Peng, S Yan, L Zhiyong Association for Computational Linguistics, Florence, Italy, 2019 | 14 | 2019 |
| Aggressivity detection on social network comments J Chen, S Yan, KC Wong Proceedings of the 2017 International Conference on Intelligent Systems …, 2017 | 9 | 2017 |
| Feature selection and feature extraction: Highlights HM Wong, X Chen, HH Tam, J Lin, S Zhang, S Yan, X Li, KC Wong Proceedings of the 2021 5th International Conference on Intelligent Systems …, 2021 | 8 | 2021 |
| Future DNA computing device and accompanied tool stack: Towards high-throughput computation S Yan, KC Wong Future Generation Computer Systems 117, 111-124, 2021 | 8 | 2021 |
| Elucidating high-dimensional cancer hallmark annotation via enriched ontology S Yan, KC Wong Journal of Biomedical Informatics 73, 84-94, 2017 | 7 | 2017 |
| GESgnExt: gene expression signature extraction and meta-analysis on gene expression omnibus S Yan, KC Wong IEEE Journal of Biomedical and Health Informatics 24 (1), 311-318, 2019 | 5 | 2019 |
| Deleterious non-synonymous single nucleotide polymorphism predictions on human transcription factors KC Wong, S Yan, Q Lin, X Li, C Peng IEEE/ACM transactions on computational biology and bioinformatics 17 (1 …, 2018 | 5 | 2018 |
| PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology S Yan, L Luo, PT Lai, D Veltri, AJ Oler, S Xirasagar, R Ghosh, M Similuk, ... Journal of biomedical informatics 129, 104059, 2022 | 4 | 2022 |
| MotifHub: Detection of trans-acting DNA motif group with probabilistic modeling algorithm Z Liu, HM Wong, X Chen, J Lin, S Zhang, S Yan, F Wang, X Li, KC Wong Computers in Biology and Medicine 168, 107753, 2024 | | 2024 |
| Artificial Intelligence (AI) in Action: Addressing the COVID-19 Pandemic with Natural Language Processing (NLP)(preprint) Q Chen, R Leaman, A Allot, L Luo, CH Wei, S Yan, Z Lu | | 2020 |
| Supplementary Material for: DNA Sequencing Technologies: Sequencing Data Protocols and Bioinformatics Tools KAC WONG, J ZHANG, S YAN, X LI, Q LIN, SAM KWONG, C LIANG | | 2019 |
Zhiyong LuDeputy Director for Literature Search, NCBI; Senior Investigator, NLM; Adjunct Professor of CS, UIUCVerified email at nih.gov
