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Mohamed Hamed, PhD
Mohamed Hamed, PhD
Computer Science, Bioinformatics, IBIMA, Rostock University.
Verified email at uni-rostock.de
Title
Cited by
Cited by
Year
TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
M Hamed, C Spaniol, M Nazarieh, V Helms
Nucleic acids research 43 (W1), W283-W288, 2015
582015
Identification of key player genes in gene regulatory networks
M Nazarieh, A Wiese, T Will, M Hamed, V Helms
BMC Systems Biology 10, 1-12, 2016
482016
Human profilin 1 is a negative regulator of CTL mediated cell‐killing and migration
R Schoppmeyer, R Zhao, H Cheng, M Hamed, C Liu, X Zhou, ...
European journal of immunology 47 (9), 1562-1572, 2017
462017
Integrative network-based approach identifies key genetic elements in breast invasive carcinoma
M Hamed, C Spaniol, A Zapp, V Helms
BMC genomics 16, 1-14, 2015
372015
Bystander cells enhance NK cytotoxic efficiency by reducing search time
X Zhou, R Zhao, K Schwarz, M Mangeat, EC Schwarz, M Hamed, ...
Scientific reports 7 (1), 44357, 2017
232017
Combined Casein Kinase II inhibition and epigenetic modulation in acute B-lymphoblastic leukemia
A Richter, C Roolf, M Hamed, YS Gladbach, S Sender, C Konkolefski, ...
BMC cancer 19, 1-11, 2019
222019
A radiogenomic approach for decoding molecular mechanisms underlying tumor progression in prostate cancer
S Fischer, M Tahoun, B Klaan, KM Thierfelder, MA Weber, BJ Krause, ...
Cancers 11 (9), 1293, 2019
222019
FocusHeuristics–expression-data-driven network optimization and disease gene prediction
M Ernst, Y Du, G Warsow, M Hamed, N Endlich, K Endlich, ...
Scientific Reports 7 (1), 42638, 2017
212017
Cellular functions of genetically imprinted genes in human and mouse as annotated in the gene ontology
M Hamed, S Ismael, M Paulsen, V Helms
PloS one 7 (11), e50285, 2012
202012
Healthspan pathway maps in C. elegans and humans highlight transcription, proliferation/biosynthesis and lipids
S Möller, N Saul, AA Cohen, R Köhling, S Sender, HM Escobar, ...
Aging (Albany NY) 12 (13), 12534, 2020
172020
Whole genome sequence typing and microarray profiling of nasal and blood stream methicillin-resistant Staphylococcus aureus isolates: Clues to phylogeny and invasiveness
M Hamed, DP Nitsche-Schmitz, U Ruffing, M Steglich, J Dordel, D Nguyen, ...
Infection, Genetics and Evolution 36, 475-482, 2015
162015
Cellular vaccination of MLH1−/− mice – an immunotherapeutic proof of concept study
C Maletzki, YS Gladbach, M Hamed, G Fuellen, ML Semmler, J Stenzel, ...
Oncoimmunology 7 (3), e1408748, 2018
152018
Unraveling the Heterogeneous Mutational Signature of Spontaneously Developing Tumors in MLH1−/− Mice
YS Gladbach, L Wiegele, M Hamed, AM Merkenschläger, G Fuellen, ...
Cancers 11 (10), 1485, 2019
102019
BicAT_Plus: An automatic comparative tool for bi/clustering of gene expression data obtained using microarrays
FM Al-Akwaa, MH Ali, YM Kadah
2009 National Radio Science Conference, 1-8, 2009
102009
Identification of novel diabetes impaired miRNA-transcription factor co-regulatory networks in bone marrow-derived Lin-/VEGF-R2+ endothelial progenitor cells
MR Irhimeh, M Hamed, D Barthelmes, Y Gladbach, V Helms, W Shen, ...
Plos one 13 (7), e0200194, 2018
82018
Linking hematopoietic differentiation to co-expressed sets of pluripotency-associated and imprinted genes and to regulatory microRNA-transcription factor motifs
M Hamed, J Trumm, C Spaniol, R Sethi, MR Irhimeh, G Fuellen, ...
PLoS One 12 (1), e0166852, 2017
82017
TFmiR2: constructing and analyzing disease-, tissue-and process-specific transcription factor and microRNA co-regulatory networks
M Nazarieh, M Hamed, C Spaniol, T Will, V Helms
Bioinformatics 36 (7), 2300-2302, 2020
72020
A workflow for the integrative transcriptomic description of molecular pathology and the suggestion of normalizing compounds, exemplified by Parkinson’s disease
M Hamed, Y Gladbach, S Möller, S Fischer, M Ernst, S Struckmann, ...
Scientific Reports 8 (1), 7937, 2018
72018
TGF-ß1 Induces Changes in the Energy Metabolism of White Adipose Tissue-Derived Human Adult Mesenchymal Stem/Stromal Cells In Vitro
O Hahn, LC Ingwersen, A Soliman, M Hamed, G Fuellen, M Wolfien, ...
Metabolites 10 (2), 59, 2020
62020
Towards biomarkers for outcomes after pancreatic ductal adenocarcinoma and ischaemic stroke, with focus on (co)-morbidity and ageing/cellular senescence (SASKit): protocol for …
L Henze, U Walter, HM Escobar, C Junghanss, R Jaster, R Köhling, ...
BMJ open 10 (12), e039560, 2020
52020
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