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Dominik Klein
Dominik Klein
Helmholtz Center Munich
Verified email at helmholtz-munich.de
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Year
A sandbox for prediction and integration of DNA, RNA, and proteins in single cells
MD Luecken, DB Burkhardt, R Cannoodt, C Lance, A Agrawal, H Aliee, ...
Thirty-fifth conference on neural information processing systems datasets …, 2021
662021
Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells
A Gayoso, P Weiler, M Lotfollahi, D Klein, J Hong, A Streets, FJ Theis, ...
Nature methods 21 (1), 50-59, 2024
242024
Protein-ligand interaction graphs: Learning from ligand-shaped 3d interaction graphs to improve binding affinity prediction
MA Moesser, D Klein, F Boyles, CM Deane, A Baxter, GM Morris
BioRxiv, 2022.03. 04.483012, 2022
142022
Mapping cells through time and space with moscot
D Klein, G Palla, M Lange, M Klein, Z Piran, M Gander, ...
bioRxiv, 2023.05. 11.540374, 2023
12*2023
Modeling single-cell dynamics using unbalanced parameterized monge maps
LV Eyring, D Klein, G Palla, S Becker, P Weiler, N Kilbertus, FJ Theis
bioRxiv, 2022.10. 04.510766, 2022
42022
Unbalancedness in Neural Monge Maps Improves Unpaired Domain Translation
L Eyring, D Klein, T Uscidda, G Palla, N Kilbertus, Z Akata, F Theis
arXiv preprint arXiv:2311.15100, 2023
12023
An integrated transcriptomic cell atlas of human endoderm-derived organoids
Q Xu, L Halle, S Hediyeh-zadeh, M Kuijs, U Kilik, Q Yu, T Frum, L Adam, ...
bioRxiv, 2023.11. 20.567825, 2023
12023
Mapping lineage-traced cells across time points with moslin
M Lange, Z Piran, M Klein, B Spanjaard, D Klein, JP Junker, FJ Theis, ...
bioRxiv, 2023.04. 14.536867, 2023
12023
Generative Entropic Neural Optimal Transport To Map Within and Across Spaces
D Klein, T Uscidda, F Theis, M Cuturi
arXiv preprint arXiv:2310.09254, 2023
2023
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Articles 1–9