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Alex N Nguyen Ba
Alex N Nguyen Ba
Assistant Professor, University of Toronto
Verified email at utoronto.ca - Homepage
Title
Cited by
Cited by
Year
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337-341, 2009
16482009
NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction
AN Nguyen Ba, A Pogoutse, N Provart, AM Moses
BMC Bioinformatics 10 (1), 202, 2009
6572009
A high-definition view of functional genetic variation from natural yeast genomes
A Bergström, JT Simpson, F Salinas, B Barré, L Parts, A Zia, ...
Molecular Biology and Evolution 31 (4), 872-888, 2014
3062014
Proteome-wide signatures of function in highly diverged intrinsically disordered regions
T Zarin, B Strome, AN Nguyen Ba, S Alberti, JD Forman-Kay, AM Moses
Elife 8, e46883, 2019
1402019
Proteome-wide discovery of evolutionary conserved sequences in disordered regions
AN Nguyen Ba, BJ Yeh, D van Dyk, AR Davidson, BJ Andrews, EL Weiss, ...
Science Signaling 5 (215), rs1-rs1, 2012
1282012
High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeast
AN Nguyen Ba*, I Cvijović*, JI Rojas Echenique*, KR Lawrence, ...
Nature 575 (7783), 494-499, 2019
1102019
High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome
G Liti, AN Nguyen Ba, M Blythe, CA Müller, A Bergström, FA Cubillos, ...
BMC Genomics 14 (1), 69, 2013
1012013
Exploring whole-genome duplicate gene retention with complex genetic interaction analysis
E Kuzmin, B VanderSluis, AN Nguyen Ba, W Wang, EN Koch, M Usaj, ...
Science 368 (6498), eaaz5667, 2020
822020
A quantitative literature-curated gold standard for kinase-substrate pairs
S Sharifpoor*, AN Nguyen Ba*, JY Young, D van Dyk, H Friesen, ...
Genome Biology 12 (4), 1, 2011
812011
Evolution of characterized phosphorylation sites in budding yeast
AN Nguyen Ba, AM Moses
Molecular Biology and Evolution 27 (9), 2027-2037, 2010
782010
Selection maintains signaling function of a highly diverged intrinsically disordered region
T Zarin, CN Tsai, AN Nguyen Ba, AM Moses
Proceedings of the National Academy of Sciences, 201614787, 2017
722017
Microwave-generated steam decontamination of N95 respirators utilizing universally accessible materials.
KE Zulauf, AB Green, AN Nguyen Ba, T Jagdish, D Reif, R Seeley, A Dale, ...
mBio 11 (e00997-20), 2020
642020
Phenotypic and molecular evolution across 10,000 generations in laboratory budding yeast populations
MS Johnson, S Gopalakrishnan, J Goyal, ME Dillingham, CW Bakerlee, ...
Elife 10, e63910, 2021
592021
Modular epistasis and the compensatory evolution of gene deletion mutants
JI Rojas Echenique, S Kryazhimskiy, AN Nguyen Ba, MM Desai
PLoS Genetics 15 (2), e1007958, 2019
532019
The Structure of an NDR/LATS Kinase–Mob Complex Reveals a Novel Kinase–Coactivator System and Substrate Docking Mechanism
G Gógl, KD Schneider, BJ Yeh, N Alam, AN Nguyen Ba, AM Moses, ...
PLoS Biology 13 (5), e1002146, 2015
492015
Chance and necessity in the pleiotropic consequences of adaptation for budding yeast
ER Jerison, AN Nguyen Ba, MM Desai, S Kryazhimskiy
Nature Ecology & Evolution 4 (4), 601-611, 2020
462020
Detecting Functional Divergence after Gene Duplication through Evolutionary Changes in Posttranslational Regulatory Sequences
AN Nguyen Ba, B Strome, JJ Hua, J Desmond, I Gagnon-Arsenault, ...
PLoS Computational Biology 10 (12), e1003977, 2014
442014
Experimental Studies of Evolutionary Dynamics in Microbes
I Cvijović, AN Nguyen Ba, MM Desai
Trends in Genetics 34 (9), 693-703, 2018
432018
Barcoded bulk QTL mapping reveals highly polygenic and epistatic architecture of complex traits in yeast
AN Nguyen Ba*, KR Lawrence*, A Rego-Costa*, S Gopalakrishnan, ...
eLife 11, e73983, 2022
382022
Idiosyncratic epistasis leads to global fitness–correlated trends
CW Bakerlee*, AN Nguyen Ba*, Y Shulgina, JI Rojas Echenique, ...
Science 376 (6593), 630-635, 2022
372022
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