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Sophie Shaw
Sophie Shaw
Lead Bioinformatician for Research and Development, All Wales Medical Genomics Service
Verified email at wales.nhs.uk
Title
Cited by
Cited by
Year
The effect of vitamin D on intestinal inflammation and faecal microbiota in patients with ulcerative colitis
M Garg, P Hendy, JN Ding, S Shaw, G Hold, A Hart
Journal of Crohn's and Colitis, 2018
1122018
Formate cross‐feeding and cooperative metabolic interactions revealed by transcriptomics in co‐cultures of acetogenic and amylolytic human colonic bacteria
JA Laverde Gomez, I Mukhopadhya, SH Duncan, P Louis, S Shaw, ...
Environmental Microbiology, 2018
622018
Transcriptional landscape of trans‐kingdom communication between Candida albicans and Streptococcus gordonii
LC Dutton, KH Paszkiewicz, RJ Silverman, PR Splatt, S Shaw, AH Nobbs, ...
Molecular oral microbiology 31 (2), 136-161, 2016
602016
Budding yeast Rif1 binds to replication origins and protects DNA at blocked replication forks
S Hiraga, C Monerawela, Y Katou, S Shaw, KRM Clark, K Shirahige, ...
EMBO reports 19 (9), e46222, 2018
412018
Transcriptional reprogramming underpins enhanced plant growth promotion by the biocontrol fungus Trichoderma hamatum GD12 during antagonistic interactions with Sclerotinia …
S Shaw, K Le Cocq, K Paszkiewicz, K Moore, R Winsbury, MT Zabala, ...
Molecular Plant Pathology, 2016
362016
Domestication of Campylobacter jejuni NCTC 11168
B Pascoe, LK Williams, JK Calland, G Meric, MD Hitchings, M Dyer, ...
Microbial Genomics, 2019
342019
Oral bacterial diversity is inversely correlated with mucosal inflammation
K Hijazi, RW Morrison, I Mukhopadhya, B Martin, M Gemmell, S Shaw, ...
Oral Diseases 26 (7), 1566-1575, 2020
322020
Pressure and temperature effects on deep‐sea hydrocarbon‐degrading microbial communities in subarctic sediments
LJ Perez Calderon, E Gontikaki, LD Potts, S Shaw, A Gallego, ...
MicrobiologyOpen, e768, 2018
262018
β‐glucan is a major growth substrate for human gut bacteria related to Coprococcus eutactus
AM Alessi, V Gray, FM Farquharson, A Flores‐López, S Shaw, D Stead, ...
Environmental Microbiology, 2020
252020
Distribution, organization and expression of genes concerned with anaerobic lactate utilization in human intestinal bacteria
PO Sheridan, P Louis, E Tsompanidou​, S Shaw, HJ Harmsen​, ...
MGen 8 (1), 2022
232022
Fetal androgen exposure is a determinant of adult male metabolic health
KJ Siemienowicz, P Filis, S Shaw, A Douglas, J Thomas, S Mulroy, ...
Scientific Reports 9, 2019
222019
Nationwide Stepwise Emergence and Evolution of Multidrug-Resistant Campylobacter jejuni Sequence Type 5136, United Kingdom
B Lopes, N Strachan, M Ramjee, A Thomson, M MacRae, S Shaw, ...
Emerging Infectious Diseases 25 (7), 2019
212019
Foxh1/Nodal defines context-specific direct maternal Wnt/β-catenin target gene regulation in early development
BA Afouda, Y Nakamura, S Shaw, RM Charney, KD Paraiso, IL Blitz, ...
Iscience 23 (7), 2020
192020
Integration of Transcriptome, Gross Morphology and Histopathology in the Gill of Sea Farmed Atlantic Salmon (Salmo salar): Lessons from Multi-site Sampling
E Krol, P Noguera, S Shaw, E Costelloe, K Gajardo, V Valdenegro, ...
Frontiers in Genetics, 2020
182020
Comparative transcriptomics and host-specific parasite gene expression profiles inform on drivers of proliferative kidney disease
M Faber, S Yoon, S Shaw, E de Paiva Alves, B Wang, Q Zhitao, ...
Scientific Reports 11, 2149, 2021
162021
Rapid genome sequencing for pediatrics
J Jezkova, S Shaw, N Taverner, HJ Williams
Human Mutation, 2022
142022
Role of Candida albicans Tem1 in mitotic exit and cytokinesis
SW Milne, J Cheetham, D Lloyd, S Shaw, K Moore, KH Paszkiewicz, ...
Fungal Genetics and Biology 69, 84-95, 2014
142014
Changes in the gut microbiota of Nigerian infants within the first year of life
OT Oyedemi, S Shaw, JC Martin, FA Ayeni, KP Scott
PLOS One, 2022
122022
Comparison of microbial signatures between faecal and rectal biopsy samples from healthy volunteers using next generation sequencing and culturomics
I Mukhopadhya, JC Martin, S Shaw, AJ McKinley, SW Gratz, KP Scott
Microbiome 10, 171, 2022
112022
Daily Fermented Whey Consumption Alters the Fecal Short-Chain Fatty Acid Profile in Healthy Adults
NM Smith, NG Maloney, S Shaw, GW Horgan, C Fyfe, JC Martin, A Suter, ...
Frontiers in Nutrition, 2020
82020
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Articles 1–20