| De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes MB Hufford, AS Seetharam, MR Woodhouse, KM Chougule, S Ou, J Liu, ... Science 373 (6555), 655-662, 2021 | 310 | 2021 |
| Widespread long-range cis-regulatory elements in the maize genome WA Ricci, Z Lu, L Ji, AP Marand, CL Ethridge, NG Murphy, JM Noshay, ... Nature plants 5 (12), 1237-1249, 2019 | 261 | 2019 |
| The prevalence, evolution and chromatin signatures of plant regulatory elements Z Lu, AP Marand, WA Ricci, CL Ethridge, X Zhang, RJ Schmitz Nature Plants 5 (12), 1250-1259, 2019 | 222 | 2019 |
| A cis-regulatory atlas in maize at single-cell resolution AP Marand, Z Chen, A Gallavotti, RJ Schmitz Cell 184 (11), 3041-3055. e21, 2021 | 188 | 2021 |
| Genome sequence of M6, a diploid inbred clone of the high‐glycoalkaloid‐producing tuber‐bearing potato species Solanum chacoense, reveals residual … CP Leisner, JP Hamilton, E Crisovan, NC Manrique‐Carpintero, ... The Plant Journal 94 (3), 562-570, 2018 | 133 | 2018 |
| Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato Z Zeng, W Zhang, AP Marand, B Zhu, CR Buell, J Jiang Genome biology 20, 1-17, 2019 | 113 | 2019 |
| Chromatin accessibility profiling methods LM Minnoye, GK Marinov, T Krausgruber, L Pan, AP Marand, S Secchia, ... Nature Reviews Methods Primers 1 (1), 2021 | 112 | 2021 |
| Proliferation of regulatory DNA elements derived from transposable elements in the maize genome H Zhao, W Zhang, L Chen, L Wang, AP Marand, Y Wu, J Jiang Plant physiology 176 (4), 2789-2803, 2018 | 76 | 2018 |
| PlantDHS: a database for DNase I hypersensitive sites in plants T Zhang, AP Marand, J Jiang Nucleic acids research 44 (D1), D1148-D1153, 2016 | 73 | 2016 |
| Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes PA Crisp, AP Marand, JM Noshay, P Zhou, Z Lu, RJ Schmitz, NM Springer Proceedings of the National Academy of Sciences 117 (38), 23991-24000, 2020 | 65 | 2020 |
| Meiotic crossovers are associated with open chromatin and enriched with Stowaway transposons in potato AP Marand, SH Jansky, H Zhao, CP Leisner, X Zhu, Z Zeng, E Crisovan, ... Genome biology 18, 1-16, 2017 | 65 | 2017 |
| Towards genome-wide prediction and characterization of enhancers in plants AP Marand, T Zhang, B Zhu, J Jiang Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1860 (1), 131-139, 2017 | 50 | 2017 |
| Historical meiotic crossover hotspots fueled patterns of evolutionary divergence in rice AP Marand, H Zhao, W Zhang, Z Zeng, C Fang, J Jiang The Plant Cell 31 (3), 645-662, 2019 | 43 | 2019 |
| Vision, challenges and opportunities for a Plant Cell Atlas SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer, SC Huang, P Karia, ... Elife 10, e66877, 2021 | 42 | 2021 |
| cis-Regulatory Elements in Plant Development, Adaptation, and Evolution AP Marand, AL Eveland, K Kaufmann, NM Springer Annual review of plant biology 74, 111-137, 2023 | 39 | 2023 |
| Identification of a novel base J binding protein complex involved in RNA polymerase II transcription termination in trypanosomes R Kieft, Y Zhang, AP Marand, JD Moran, R Bridger, L Wells, RJ Schmitz, ... PLoS genetics 16 (2), e1008390, 2020 | 33 | 2020 |
| Assessing the regulatory potential of transposable elements using chromatin accessibility profiles of maize transposons JM Noshay, AP Marand, SN Anderson, P Zhou, MK Mejia Guerra, Z Lu, ... Genetics 217 (1), 1-13, 2021 | 29* | 2021 |
| Single-cell analysis of cis-regulatory elements AP Marand, RJ Schmitz Current Opinion in Plant Biology 65, 102094, 2022 | 23 | 2022 |
| Residual heterozygosity and epistatic interactions underlie the complex genetic architecture of yield in diploid potato AP Marand, SH Jansky, JL Gage, AJ Hamernik, N de Leon, J Jiang Genetics 212 (1), 317-332, 2019 | 23 | 2019 |
| The prevalence, evolution and chromatin signatures of plant regulatory elements. Nat. Plants 5: 1250–1259 Z Lu, AP Marand, WA Ricci, CL Ethridge, X Zhang, RJ Schmitz | 12 | 2019 |
Robert J SchmitzDept. of Genetics, University of GeorgiaVerified email at uga.edu
