Multi-species protein similarity clustering reveals novel expanded immune gene families in the eastern oyster Crassostrea virginica IC McDowell, TH Modak, CE Lane, M Gomez-Chiarri Fish & shellfish immunology 53, 13-23, 2016 | 53 | 2016 |
Bacterial community dynamics in an oyster hatchery in response to probiotic treatment RJ Stevick, S Sohn, TH Modak, DR Nelson, DC Rowley, K Tammi, ... Frontiers in Microbiology 10, 1060, 2019 | 41 | 2019 |
Contrasting immunomodulatory effects of probiotic and pathogenic bacteria on eastern oyster, crassostrea virginica, larvae TH Modak, M Gomez-Chiarri Vaccines 8 (4), 588, 2020 | 25 | 2020 |
Extensive genome-wide duplications in the eastern oyster (Crassostrea virginica) TH Modak, R Literman, JB Puritz, KM Johnson, EM Roberts, D Proestou, ... Philosophical Transactions of the Royal Society B 376 (1825), 20200164, 2021 | 19 | 2021 |
A second unveiling: Haplotig masking of the eastern oyster genome improves population‐level inference JB Puritz, X Guo, M Hare, Y He, LDW Hillier, S Jin, M Liu, KE Lotterhos, ... Molecular Ecology Resources 24 (1), e13801, 2024 | 8 | 2024 |
Sociobiology of biodegradation and the role of predatory protozoa in biodegrading communities T Modak, S Pradhan, M Watve Journal of biosciences 32, 775-780, 2007 | 8 | 2007 |
Inter-and intra-archipelago dynamics of population structure and gene flow in a Polynesian bird XM Mapel, EF Gyllenhaal, TH Modak, LH DeCicco, A Naikatini, ... Molecular Phylogenetics and Evolution 156, 107034, 2021 | 6 | 2021 |
Nucleotide and structural polymorphisms of the eastern oyster genome paint a mosaic of divergence, selection, and human impacts JB Puritz, H Zhao, X Guo, MP Hare, Y He, J LaPeyre, KE Lotterhos, ... BioRxiv, 2022.08. 29.505629, 2022 | 3 | 2022 |
Eastern oyster larval Transcriptomes in response to probiotic and pathogenic Bacteria T Modak University of Rhode Island, 2018 | 2 | 2018 |
Evolutionary Origins of the Samoan Avifauna T Modak Boston University, 2011 | 1 | 2011 |
Robust Bioinformatic Method for Estimating Tumor Content in cfDNA Using De-noised Target Sequencing A Conley, A Kotlar, J Aldersley, Y Cao, Y Ke, M Liu, K McFarland, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S86-S86, 2023 | | 2023 |
oncoReveal Fusion LBx: Single-Tube Multiplexed PCR-Based NGS Assay for Detection of Multiple Gene Fusions from Cell-Free RNA T Modak, Z Wang, J Aldersley, K Berger, Y Ke, A Kotlar, J Li, M Liu, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S102-S103, 2023 | | 2023 |
In silico Replacement for Molecular Barcoding with High Sensitivity and Specificity Variant Calling in Liquid Biopsy NGS Assays with Low Input and Tumor Content A Conley, T Modak, S Polvino, L Rishishwar, A Kotlar JOURNAL OF MOLECULAR DIAGNOSTICS 24 (10), S79-S79, 2022 | | 2022 |
Single tube PCR-based NGS assay for detection of multiple gene fusions from cell free total nucleic acid T Modak, J Li, S Polvino, Y Ke, Z Wang, AV Kotlar Cancer Research 82 (12_Supplement), 5996-5996, 2022 | | 2022 |
Immune responses of American oysters to bacterial and parasitic challenge M Gomez-Chiarri, T Modak, E Roberts, R Stevick, D Nelson, D Rowley Fish & Shellfish Immunology 91, 462-463, 2019 | | 2019 |
Conference report: The 14th congress of the International Society of Developmental and Comparative Immunology K Abernath, M Banach, MA Barela Hudgell, LE Blackmon, B Breaux, ... Developmental & Comparative Immunology 96 (C), 2019 | | 2019 |
Novel expanded immune gene families in the Eastern oyster Crassostrea virginica M Gomez-Chiarri, IC McDowell, TH Modak | | |