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Fang Wang
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Comprehensive characterization of cancer driver genes and mutations
MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ...
Cell 173 (2), 371-385. e18, 2018
21412018
Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes
R Gao, S Bai, YC Henderson, Y Lin, A Schalck, Y Yan, T Kumar, M Hu, ...
Nature biotechnology 39 (5), 599-608, 2021
3522021
Systematic analysis of splice-site-creating mutations in cancer
RG Jayasinghe, S Cao, Q Gao, MC Wendl, NS Vo, SM Reynolds, Y Zhao, ...
Cell reports 23 (1), 270-281. e3, 2018
2172018
Single-cell dissection of intratumoral heterogeneity and lineage diversity in metastatic gastric adenocarcinoma
R Wang, M Dang, K Harada, G Han, F Wang, M Pool Pizzi, M Zhao, ...
Nature medicine 27 (1), 141-151, 2021
1552021
QDMR: a quantitative method for identification of differentially methylated regions by entropy
Y Zhang, H Liu, J Lv, X Xiao, J Zhu, X Liu, J Su, X Li, Q Wu, F Wang, Y Cui
Nucleic acids research 39 (9), e58-e58, 2011
1492011
Targeting the αv integrin/TGF-β axis improves natural killer cell function against glioblastoma stem cells
H Shaim, M Shanley, R Basar, M Daher, J Gumin, DB Zamler, N Uprety, ...
The Journal of Clinical Investigation 131 (14), 2021
1482021
DiseaseMeth: a human disease methylation database
J Lv, H Liu, J Su, X Wu, H Liu, B Li, X Xiao, F Wang, Q Wu, Y Zhang
Nucleic acids research 40 (D1), D1030-D1035, 2012
1162012
HHMD: the human histone modification database
Y Zhang, J Lv, H Liu, J Zhu, J Su, Q Wu, Y Qi, F Wang, X Li
Nucleic acids research 38 (suppl_1), D149-D154, 2010
1022010
SEA: a super-enhancer archive
Y Wei, S Zhang, S Shang, B Zhang, S Li, X Wang, F Wang, J Su, Q Wu, ...
Nucleic acids research 44 (D1), D172-D179, 2016
982016
Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the …
H Liu, X Liu, S Zhang, J Lv, S Li, S Shang, S Jia, Y Wei, F Wang, J Su, ...
Nucleic acids research 44 (1), 75-94, 2016
822016
Spatially restricted drivers and transitional cell populations cooperate with the microenvironment in untreated and chemo-resistant pancreatic cancer
D Cui Zhou, RG Jayasinghe, S Chen, JM Herndon, MD Iglesia, P Navale, ...
Nature genetics 54 (9), 1390-1405, 2022
772022
CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data
J Su, H Yan, Y Wei, H Liu, H Liu, F Wang, J Lv, Q Wu, Y Zhang
Nucleic acids research 41 (1), e4-e4, 2013
662013
The identification of specific methylation patterns across different cancers
C Zhang, H Zhao, J Li, H Liu, F Wang, Y Wei, J Su, D Zhang, T Liu, ...
PloS one 10 (3), e0120361, 2015
652015
CpG_MI: a novel approach for identifying functional CpG islands in mammalian genomes
J Su, Y Zhang, J Lv, H Liu, X Tang, F Wang, Y Qi, Y Feng, X Li
Nucleic acids research 38 (1), e6-e6, 2010
522010
Group MCW
MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ...
Cancer Genome Atlas Research N, Lawrence MS, Godzik A, Lopez-Bigas N, Stuart …, 2018
432018
MetaImprint: an information repository of mammalian imprinted genes
Y Wei, J Su, H Liu, J Lv, F Wang, H Yan, Y Wen, H Liu, Q Wu, Y Zhang
Development 141 (12), 2516-2523, 2014
412014
SCMarker: ab initio marker selection for single cell transcriptome profiling
F Wang, S Liang, T Kumar, N Navin, K Chen
PLoS computational biology 15 (10), e1007445, 2019
322019
Latent periodic process inference from single-cell RNA-seq data
S Liang, F Wang, J Han, K Chen
Nature communications 11 (1), 1441, 2020
312020
Cell subpopulation deconvolution reveals breast cancer heterogeneity based on DNA methylation signature
Y Wen, Y Wei, S Zhang, S Li, H Liu, F Wang, Y Zhao, D Zhang, Y Zhang
Briefings in bioinformatics 18 (3), 426-440, 2017
272017
The identification of age-associated cancer markers by an integrative analysis of dynamic DNA methylation changes
Y Wang, J Zhang, X Xiao, H Liu, F Wang, S Li, Y Wen, Y Wei, J Su, ...
Scientific reports 6 (1), 22722, 2016
262016
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