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Yuping Zhang
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Year
A genomic storm in critically injured humans
W Xiao, MN Mindrinos, J Seok, J Cuschieri, AG Cuenca, H Gao, ...
Journal of Experimental Medicine 208 (13), 2581-2590, 2011
12452011
Stochastic model of yeast cell-cycle network
Y Zhang, M Qian, Q Ouyang, M Deng, F Li, C Tang
Physica D: Nonlinear Phenomena 219 (1), 35-39, 2006
1052006
HSA: integrating multi-track Hi-C data for genome-scale reconstruction of 3D chromatin structure
C Zou, Y Zhang, Z Ouyang
Genome biology 17 (1), 40, 2016
742016
Decision making of the p53 network: Death by integration
Z Li, M Ni, J Li, Y Zhang, Q Ouyang, C Tang
Journal of theoretical biology 271 (1), 205-211, 2011
492011
STAT3 targets suggest mechanisms of aggressive tumorigenesis in diffuse large B-cell lymphoma
J Hardee, Z Ouyang, Y Zhang, A Kundaje, P Lacroute, M Snyder
G3: Genes, Genomes, Genetics 3 (12), 2173-2185, 2013
412013
Online updating method with new variables for big data streams
C Wang, MH Chen, J Wu, J Yan, Y Zhang, E Schifano
Canadian Journal of Statistics 46 (1), 123-146, 2018
312018
A statistical framework for data integration through graphical models with application to cancer genomics
Y Zhang, Z Ouyang, H Zhao
The Annals of Applied Statistics 11 (1), 161-184, 2017
282017
Classification of patients from time-course gene expression
Y Zhang, R Tibshirani, R Davis
Biostatistics 14 (1), 87-98, 2012
162012
Kinetic behavior of the general modifier mechanism of Botts and Morales with non-equilibrium binding
C Jia, XF Liu, MP Qian, DQ Jiang, YP Zhang
Journal of theoretical biology 296, 13-20, 2012
152012
Clustering by propagating probabilities between data points
G Gan, Y Zhang, DK Dey
Applied Soft Computing 41, 390-399, 2016
132016
Stochastic model of coliphage lambda regulatory network
S Wang, Y Zhang, Q Ouyang
Physical Review E 73 (4), 041922, 2006
122006
Principal trend analysis for time-course data with applications in genomic medicine
Y Zhang, R Davis
The Annals of Applied Statistics, 2205-2228, 2013
112013
Predicting patient survival from longitudinal gene expression
Y Zhang, RJ Tibshirani, RW Davis
Statistical applications in genetics and molecular biology 9 (1), 2010
112010
LISA: Accurate reconstruction of cell trajectory and pseudo-time for massive single cell RNA-seq data.
Y Chen, Y Zhang, Z Ouyang
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 24, 338-349, 2019
92019
Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data
Y Zhang, MH Linder, A Shojaie, Z Ouyang, R Shen, KA Baggerly, ...
Statistics in Biosciences 10 (1), 86-106, 2018
92018
Nonequilibrium model for yeast cell cycle
Y Zhang, H Yu, M Deng, M Qian
International Conference on Intelligent Computing, 786-791, 2006
82006
Joint principal trend analysis for longitudinal high‐dimensional data
Y Zhang, Z Ouyang
Biometrics 74 (2), 430-438, 2018
62018
Predicting quantitative outcomes of patients using longitudinal gene expression
Y Zhang, Z Ouyang
Sri Lankan Journal of Applied Statistics 5 (4), 2014
22014
Lagged principal trend analysis for longitudinal high‐dimensional data
Y Zhang
Stat 8 (1), e213, 2019
12019
PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
G Gonzalez-Hernandez, Z Lu, R Leaman, D Weissenbacher, MR Boland, ...
Pacific Symposium on Biocomputing 2019, 449-454, 2018
2018
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