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Eeshit Dhaval Vaishnav
Eeshit Dhaval Vaishnav
MIT, IIT Kanpur
Verified email at mit.edu - Homepage
Title
Cited by
Cited by
Year
A cellular taxonomy of the bone marrow stroma in homeostasis and leukemia
N Baryawno, D Przybylski, MS Kowalczyk, Y Kfoury, N Severe, ...
Cell 177 (7), 1915-1932. e16, 2019
6732019
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine 27 (3), 546-559, 2021
548*2021
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
MP Snyder, S Lin, A Posgai, M Atkinson, A Regev, J Rood, ...
Nature 574 (7777), 187, 2019
3752019
A multimodal cell census and atlas of the mammalian primary motor cortex
RS Adkins, AI Aldridge, S Allen, SA Ament, X An, E Armand, GA Ascoli, ...
Nature 598 (7879), 86, 2021
283*2021
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
242*2021
Deciphering eukaryotic gene-regulatory logic with 100 million random promoters
CG de Boer, ED Vaishnav, R Sadeh, EL Abeyta, N Friedman, A Regev
Nature biotechnology 38 (1), 56-65, 2020
2172020
The evolution, evolvability and engineering of gene regulatory DNA
ED Vaishnav, CG de Boer, J Molinet, M Yassour, L Fan, X Adiconis, ...
Nature, 1-9, 2022
1342022
Actomyosin meshwork mechanosensing enables tissue shape to orient cell force
S Chanet, CJ Miller, ED Vaishnav, B Ermentrout, LA Davidson, AC Martin
Nature communications 8 (1), 15014, 2017
1332017
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)
S Jain, L Pei, JM Spraggins, M Angelo, JP Carson, N Gehlenborg, F Ginty, ...
Nature cell biology, 1-12, 2023
362023
Inference of single cell profiles from histology stains with the Single-Cell omics from Histology Analysis Framework (SCHAF)
C Comiter, ED Vaishnav, M Ciampricotti, B Li, Y Yang, SJ Rodig, M Turner, ...
BioRxiv, 2023.03. 21.533680, 2023
132023
Reference-based cell type matching of in situ image-based spatial transcriptomics data on primary visual cortex of mouse brain
Y Zhang, JA Miller, J Park, BP Lelieveldt, B Long, T Abdelaal, ...
Scientific Reports 13 (1), 9567, 2023
9*2023
SpaceTx: a roadmap for benchmarking spatial transcriptomics exploration of the brain
B Long, J Miller, TST Consortium
arXiv preprint arXiv:2301.08436, 2023
92023
A comprehensive fitness landscape model reveals the evolutionary history and future evolvability of eukaryotic cis-regulatory DNA sequences
ED Vaishnav, CG de Boer, M Yassour, J Molinet, L Fan, X Adiconis, ...
bioRxiv, 2021
62021
Evaluation and optimization of sequence-based gene regulatory deep learning models
AM Rafi, D Nogina, D Penzar, D Lee, D Lee, N Kim, S Kim, D Kim, Y Shin, ...
bioRxiv, 2023
22023
Methods and systems for determining gene expression profiles and cell identities from multi-omic imaging data
A Regev, ED Vaishnav
US Patent App. 17/553,691, 2022
2022
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