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Adi Stern
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Year
The phage‐host arms race: shaping the evolution of microbes
A Stern, R Sorek
Bioessays 33 (1), 43-51, 2011
6012011
Self-targeting by CRISPR: gene regulation or autoimmunity?
A Stern, L Keren, O Wurtzel, G Amitai, R Sorek
Trends in genetics 26 (8), 335-340, 2010
4642010
Evidence for increased breakthrough rates of SARS-CoV-2 variants of concern in BNT162b2-mRNA-vaccinated individuals
T Kustin, N Harel, U Finkel, S Perchik, S Harari, M Tahor, I Caspi, R Levy, ...
Nature medicine 27 (8), 1379-1384, 2021
3822021
Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach
A Stern, A Doron-Faigenboim, E Erez, E Martz, E Bacharach, T Pupko
Nucleic acids research 35 (suppl_2), W506-W511, 2007
3542007
CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome
A Stern, E Mick, I Tirosh, O Sagy, R Sorek
Genome research 22 (10), 1985-1994, 2012
2642012
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel
D Miller, MA Martin, N Harel, O Tirosh, T Kustin, M Meir, N Sorek, ...
Nature communications 11 (1), 5518, 2020
1782020
Selecton: a server for detecting evolutionary forces at a single amino-acid site
A Doron-Faigenboim, A Stern, I Mayrose, E Bacharach, T Pupko
Bioinformatics 21 (9), 2101-2103, 2005
1662005
The evolutionary pathway to virulence of an RNA virus
A Stern, M Te Yeh, T Zinger, M Smith, C Wright, G Ling, R Nielsen, ...
Cell 169 (1), 35-46. e19, 2017
1302017
Drivers of adaptive evolution during chronic SARS-CoV-2 infections
S Harari, M Tahor, N Rutsinsky, S Meijer, D Miller, O Henig, O Halutz, ...
Nature medicine 28 (7), 1501-1508, 2022
892022
Costs and benefits of mutational robustness in RNA viruses
A Stern, S Bianco, M Te Yeh, C Wright, K Butcher, C Tang, R Nielsen, ...
Cell reports 8 (4), 1026-1036, 2014
632014
A likelihood framework to analyse phyletic patterns
O Cohen, ND Rubinstein, A Stern, U Gophna, T Pupko
Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008
542008
Evolution of the metazoan protein phosphatase 2C superfamily
A Stern, E Privman, M Rasis, S Lavi, T Pupko
Journal of molecular evolution 64, 61-70, 2007
502007
Biased mutation and selection in RNA viruses
T Kustin, A Stern
Molecular Biology and Evolution 38 (2), 575-588, 2021
482021
A method to identify respiratory virus infections in clinical samples using next-generation sequencing
T Kustin, G Ling, S Sharabi, D Ram, N Friedman, N Zuckerman, ED Bucris, ...
Scientific reports 9 (1), 2606, 2019
422019
Assessing the prediction fidelity of ancestral reconstruction by a library approach
H Bar-Rogovsky, A Stern, O Penn, I Kobl, T Pupko, DS Tawfik
Protein Engineering, Design and Selection 28 (11), 507-518, 2015
422015
An evolutionary analysis of lateral gene transfer in thymidylate synthase enzymes
A Stern, I Mayrose, O Penn, S Shaul, U Gophna, T Pupko
Systematic biology 59 (2), 212-225, 2010
402010
Evolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypes
O Penn, A Stern, ND Rubinstein, J Dutheil, E Bacharach, N Galtier, ...
PLoS computational biology 4 (11), e1000214, 2008
402008
Holding a grudge: persisting anti-phage CRISPR immunity in multiple human gut microbiomes
E Mick, A Stern, R Sorek
RNA biology 10 (5), 900-906, 2013
372013
Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV
K Theys, AF Feder, M Gelbart, M Hartl, A Stern, PS Pennings
PLoS genetics 14 (6), e1007420, 2018
36*2018
Direct sequencing of RNA with MinION Nanopore: detecting mutations based on associations
N Harel, M Meir, U Gophna, A Stern
Nucleic Acids Research 47 (22), e148-e148, 2019
342019
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Articles 1–20