Interpretation of differential gene expression results of RNA-seq data: review and integration A McDermaid, B Monier, J Zhao, B Liu, Q Ma Briefings in bioinformatics 20 (6), 2044-2054, 2019 | 216 | 2019 |
Ten years of the maize nested association mapping population: impact, limitations, and future directions JL Gage, B Monier, A Giri, ES Buckler The Plant Cell 32 (7), 2083-2093, 2020 | 90 | 2020 |
Machine learning-enabled phenotyping for GWAS and TWAS of WUE traits in 869 field-grown sorghum accessions JN Ferguson, SB Fernandes, B Monier, ND Miller, D Allen, A Dmitrieva, ... Plant Physiology 187 (3), 1481-1500, 2021 | 46 | 2021 |
Mycorrhiza-function, diversity, state of the art A Varma, R Prasad, N Tuteja Springer International Publishing, 2017 | 37 | 2017 |
IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis B Monier, A McDermaid, C Wang, J Zhao, A Miller, A Fennell, Q Ma PLoS computational biology 15 (2), e1006792, 2019 | 30 | 2019 |
The role of transposon inverted repeats in balancing drought tolerance and yield-related traits in maize X Sun, Y Xiang, N Dou, H Zhang, S Pei, AV Franco, M Menon, B Monier, ... Nature Biotechnology 41 (1), 120-127, 2023 | 24 | 2023 |
The Practical Haplotype Graph, a platform for storing and using pangenomes for imputation PJ Bradbury, T Casstevens, SE Jensen, LC Johnson, ZR Miller, B Monier, ... Bioinformatics 38 (15), 3698-3702, 2022 | 13 | 2022 |
Variation in upstream open reading frames contributes to allelic diversity in maize protein abundance JL Gage, S Mali, F McLoughlin, M Khaipho-Burch, B Monier, ... Proceedings of the National Academy of Sciences 119 (14), e2112516119, 2022 | 13 | 2022 |
Inter-and intraspecific fungal diversity in the arbuscular mycorrhizal symbiosis B Monier, V Peta, J Mensah, H Bücking Mycorrhiza-function, diversity, state of the art, 253-274, 2017 | 10 | 2017 |
ViDGER: An R package for integrative interpretation of differential gene expression results of RNA-seq data A McDermaid, B Monier, J Zhao, Q Ma bioRxiv, 268896, 2018 | 7 | 2018 |
rTASSEL: an R interface to TASSEL for association mapping of complex traits B Monier, TM Casstevens, PJ Bradbury, ES Buckler BioRxiv, 2020.07. 21.209114, 2020 | 5 | 2020 |
rTASSEL: An R interface to TASSEL for analyzing genomic diversity B Monier, TM Casstevens, PJ Bradbury, ES Buckler Journal of Open Source Software 7 (76), 4530, 2022 | 2 | 2022 |
IRIS-DGE: an integrated RNA-seq data analysis and interpretation system for differential gene expression B Monier, A McDermaid, J Zhao, A Fennell, Q Ma | 2 | 2018 |
Microbial communities and their impact on bioenergy crops in dynamic environments B Monier South Dakota State University, 2018 | 1 | 2018 |
Muller's Ratchet in Action: The Erosion of Sexual Reproduction Genes in Domesticated Cassava (Manihot esculenta) EM Long, MC Stitzer, B Monier, AJ Schulz, C Romay, K Robbins, ... bioRxiv, 2024.02. 14.580345, 2024 | | 2024 |
Fishing for a reelGene: evaluating gene models with evolution and machine learning AJ Schulz, J Zhai, T AuBuchon-Elder, M El-Walid, TH Ferebee, ... bioRxiv, 2023.09. 19.558246, 2023 | | 2023 |
Elucidating the patterns of pleiotropy and its biological relevance in maize M Khaipho-Burch, T Ferebee, A Giri, G Ramstein, B Monier, E Yi, ... PLoS Genetics 19 (3), e1010664, 2023 | | 2023 |
WEST Diversity Panel GBS information (Ferguson et al., 2020) JN Ferguson, SB Fernandes, B Monier, ND Miller, D Allan, A Dmitrieva, ... Univ. of Illinois at Urbana-Champaign, IL (United States), 2021 | | 2021 |
Use of lumen apposing metal stent for pyloric stenosis refractory to balloon dilatation. P Sethi, S Narayana Gowda, U Motapothula, B Baloun, M Atiq Journal of Digestive Diseases 20 (12), 2019 | | 2019 |
The Analysis of Cytotypic Variation and Construction of a BAC Library of Midwestern Prairie Cordgrass (Spartina pectinata Link) Genotypes B Monier South Dakota State University, 2013 | | 2013 |