| Transcription factor and microRNA co-regulatory loops: important regulatory motifs in biological processes and diseases HM Zhang, S Kuang, X Xiong, T Gao, C Liu, AY Guo Briefings in bioinformatics 16 (1), 45-58, 2015 | 181 | 2015 |
| MicroRNA and transcription factor co-regulatory network analysis reveals miR-19 inhibits CYLD in T-cell acute lymphoblastic leukemia H Ye, X Liu, M Lv, Y Wu, S Kuang, J Gong, P Yuan, Z Zhong, Q Li, H Jia, ... Nucleic acids research 40 (12), 5201-5214, 2012 | 152 | 2012 |
| The regulation of microRNA expression by DNA methylation in hepatocellular carcinoma XX He, SZ Kuang, JZ Liao, CR Xu, Y Chang, YL Wu, J Gong, DA Tian, ... Molecular bioSystems 11 (2), 532-539, 2015 | 81 | 2015 |
| Phylogenetic analysis reveals the evolution and diversification of cyclins in eukaryotes Z Ma, Y Wu, J Jin, J Yan, S Kuang, M Zhou, Y Zhang, AY Guo Molecular phylogenetics and evolution 66 (3), 1002-1010, 2013 | 53 | 2013 |
| Genomic data mining for functional annotation of human long noncoding RNAs BL Gudenas, J Wang, S Kuang, A Wei, SB Cogill, L Wang Journal of Zhejiang University. Science. B 20 (6), 476, 2019 | 25 | 2019 |
| MHC class I chain-related A: Polymorphism, regulation and therapeutic value in cancer X Yang, S Kuang, L Wang, Y Wei Biomedicine & Pharmacotherapy 103, 111-117, 2018 | 23 | 2018 |
| Identification and analysis of consensus RNA motifs binding to the genome regulator CTCF S Kuang, L Wang NAR Genomics and Bioinformatics 2 (2), lqaa031, 2020 | 20 | 2020 |
| Expression-based prediction of human essential genes and candidate lncRNAs in cancer cells S Kuang, Y Wei, L Wang Bioinformatics 37 (3), 396-403, 2021 | 17 | 2021 |
| RNA markers for ultra-rapid molecular antimicrobial susceptibility testing in fluoroquinolone-treated Klebsiella pneumoniae X Yang, MM Hashemi, N Andini, MM Li, S Kuang, KC Carroll, TH Wang, ... Journal of Antimicrobial Chemotherapy 75 (7), 1747-1755, 2020 | 10 | 2020 |
| Deep Learning of Sequence Patterns for CCCTC-Binding Factor-Mediated Chromatin Loop Formation S Kuang, L Wang Journal of Computational Biology 28 (2), 133-145, 2021 | 9 | 2021 |
| Comparing chromatin contact maps at scale: methods and insights LM Gunsalus, E McArthur, K Gjoni, S Kuang, M Pittman, JA Capra, ... Research Square, 2023 | 6 | 2023 |
| Exploring the Roles of RNAs in Chromatin Architecture Using Deep Learning S Kuang, KS Pollard bioRxiv, 2023.10. 22.563498, 2023 | 2 | 2023 |
| Deep Learning of CTCF-Mediated Chromatin Loops in 3D Genome Organization S Kuang, L Wang Computational Advances in Bio and Medical Sciences: 9th International …, 2020 | 1 | 2020 |
| Sequence-based machine learning reveals 3D genome differences between bonobos and chimpanzees CM Brand, S Kuang, EN Gilbertson, E McArthur, KS Pollard, TH Webster, ... bioRxiv, 2023.10. 26.564272, 2023 | | 2023 |
| Machine learning reveals the diversity of human 3D chromatin contact patterns EN Gilbertson, CM Brand, E McArthur, DC Rinker, S Kuang, KS Pollard, ... bioRxiv, 2023.12. 22.573104, 2023 | | 2023 |
| Deep Learning Models for Understanding Human Gene Function and Genome Organization S Kuang Clemson University, 2020 | | 2020 |
| 利用基因组数据挖掘对人类长非编码 RNA 进行 功能注释 BL Gudenas, J Wang, S Kuang, A Wei, SB Cogill, L Wang Journal of Zhejiang University-SCIENCE B 20, 476-487, 2019 | | 2019 |
| 利用基因组数据挖掘对人类长非编码 RNA 进行功能注释 (英文) BL GUDENAS, J WANG, S KUANG, A WEI, SB COGILL, L WANG Journal of Zhejiang University-Science B (Biomedicine & Biotechnology) 6, 2019 | | 2019 |
