Jens Stoye - Google Scholar Citations

Cited by

	All	Since 2014
Citations	7964	3308
h-index	47	29
i10-index	111	68

600

300

150

450

2000200120022003200420052006200720082009201020112012201320142015201620172018201944 52 108 117 225 284 348 375 428 459 492 486 549 556 595 573 529 566 564 477

Co-authors

Alexander GoesmannProfessor für Bioinformatik und Systembiologie, Justus-Liebig-Universität GiessenVerified email at cebitec.uni-bielefeld.de
Anne BergeronComputer Science, Université du Québec à MontréalVerified email at uqam.ca
Alfred PühlerCentrum für Biotechnologie, Universität BielefeldVerified email at cebitec.uni-bielefeld.de
Prof. Dr. Jörn KalinowskiHead of Technology Platform Genomics, Center for Biotechnology, Bielefeld UniversityVerified email at cebitec.uni-bielefeld.de
Stefan KurtzProfessor of Computer Science, University of HamburgVerified email at zbh.uni-hamburg.de
Sebastian JünemannCenter for Biotechnology - Bielefeld UniversityVerified email at cebitec.uni-bielefeld.de
Folker MeyerArgonne National Laboratory and University of ChicagoVerified email at anl.gov
Michael SammethInstitute of Biophysics Carlos Chagas Filho (IBCCF), Federal University of Rio de Janeiro (UFRJ)Verified email at sammeth.net
Lutz KrauseUniversity of Queensland Diamantina InstituteVerified email at uq.edu.au
Sebastian BöckerProfessor für Bioinformatik, FSU JenaVerified email at uni-jena.de
Steffen HeberNorth Carolina State UniversityVerified email at ncsu.edu
Daniel DoerrBielefeld UniversityVerified email at cebitec.uni-bielefeld.de
Martin VingronMax-Planck-Institut für molekulare GenetikVerified email at molgen.mpg.de
dan gusfieldUniversity of California DavisVerified email at cs.ucdavis.edu
Stefan AlbaumBioinformatics Resource Facility (BRF), Center for Biotechnology (CeBiTec), Bielefeld UniversityVerified email at cebitec.uni-bielefeld.de
Rob EdwardsProfessor of Computer Science and Biology, San Diego State UniversityVerified email at mail.sdsu.edu
Enno OhlebuschProfessor for Theoretical Bioinformatics, University of UlmVerified email at uni-ulm.de
Karsten NiehausProf., CeBiTec, Fakultät für Biologie, Universität BielefeldVerified email at cebitec.uni-bielefeld.de
Wolfgang GerlachArgonne National LaboratoryVerified email at mcs.anl.gov
Sebastian JaenickeVerified email at computational.bio.uni-giessen.de

Jens Stoye

Bielefeld University, Faculty of Technology and Center for Biotechnology (CeBiTec)

Verified email at uni-bielefeld.de - Homepage

Bioinformatics Computational Biology Algorithms Combinatorial Pattern Matching Comparative Genomics


Title	Cited by	Year
REPuter: the manifold applications of repeat analysis on a genomic scale S Kurtz, JV Choudhuri, E Ohlebusch, C Schleiermacher, J Stoye, ... Nucleic acids research 29 (22), 4633-4642, 2001	910	2001
Phylogenetic classification of short environmental DNA fragments L Krause, NN Diaz, A Goesmann, S Kelley, TW Nattkemper, F Rohwer, ... Nucleic acids research 36 (7), 2230-2239, 2008	300	2008
Rose: generating sequence families. J Stoye, D Evers, F Meyer Bioinformatics (Oxford, England) 14 (2), 157-163, 1998	296	1998
A unifying view of genome rearrangements A Bergeron, J Mixtacki, J Stoye International Workshop on Algorithms in Bioinformatics, 163-173, 2006	295	2006
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor L Krause, NN Diaz, RA Edwards, KH Gartemann, H Krömeke, ... Journal of Biotechnology 136 (1-2), 91-101, 2008	227	2008
Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms A Mellmann, T Weniger, C Berssenbrügge, J Rothgänger, M Sammeth, ... BMC microbiology 7 (1), 98, 2007	215	2007
Updating benchtop sequencing performance comparison S Jünemann, FJ Sedlazeck, K Prior, A Albersmeier, U John, J Kalinowski, ... Nature biotechnology 31 (4), 294, 2013	213	2013
Benchmarking tools for the alignment of functional noncoding DNA DA Pollard, CM Bergman, J Stoye, SE Celniker, MB Eisen BMC bioinformatics 5 (1), 6, 2004	154	2004
DCA: an efficient implementation of the divide-and-conquer approach to simultaneous multiple sequence alignment J Stoye, V Moulton, AWM Dress Bioinformatics 13 (6), 625-626, 1997	144	1997
Finding all common intervals of k permutations S Heber, J Stoye Annual Symposium on Combinatorial Pattern Matching, 207-218, 2001	141	2001
Taxonomic classification of metagenomic shotgun sequences with CARMA3 W Gerlach, J Stoye Nucleic acids research 39 (14), e91-e91, 2011	136	2011
Efficient q-gram filters for finding all ε-matches over a given length KR Rasmussen, J Stoye, EW Myers Journal of Computational Biology 13 (2), 296-308, 2006	134	2006
Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing S Jünemann, K Prior, R Szczepanowski, I Harks, B Ehmke, A Goesmann, ... PloS one 7 (8), e41606, 2012	132	2012
Multiple sequence alignment with the divide-and-conquer method J Stoye Gene 211 (2), GC45-GC56, 1998	130	1998
Linear time algorithms for finding and representing all the tandem repeats in a string D Gusfield, J Stoye Journal of Computer and System Sciences 69 (4), 525-546, 2004	126	2004
Efficient implementation of lazy suffix trees R Giegerich, S Kurtz, J Stoye Software: Practice and Experience 33 (11), 1035-1049, 2003	120	2003
The SYSTERS protein sequence cluster set A Krause, J Stoye, M Vingron Nucleic acids research 28 (1), 270-272, 2000	119	2000
r2cat: synteny plots and comparative assembly P Husemann, J Stoye Bioinformatics 26 (4), 570-571, 2009	117	2009
MeltDB: a software platform for the analysis and integration of metabolomics experiment data H Neuweger, SP Albaum, M Dondrup, M Persicke, T Watt, K Niehaus, ... Bioinformatics 24 (23), 2726-2732, 2008	115	2008
Reviews of environmental contamination and toxicology DM Whitacre Springer, 2009	109	2009

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Upload PDF

Follow this author

Cited by

Co-authors