| Sub-Cluster Identification through Semi-Supervised Optimization of Rare-Cell Silhouettes (SCISSORS) in single-cell RNA-sequencing JR Leary, Y Xu, AB Morrison, C Jin, EC Shen, PC Kuhlers, Y Su, ... Bioinformatics 39 (8), btad449, 2023 | 6 | 2023 |
| Kinome state is predictive of cell viability in pancreatic cancer tumor and stroma cell lines ME Berginski, MR Jenner, CU Joisa, SG Herrera Loeza, BT Golitz, ... BioRxiv, 2021.07. 21.451515, 2021 | 2 | 2021 |
| Sub-Cluster Identification through Semi-Supervised Optimization of Rare-cell Silhouettes (SCISSORS) in Single-Cell Sequencing J Leary, Y Xu, A Morrison, C Jin, EC Shen, Y Su, N Rashid, JJ Yeh, ... bioRxiv, 2021.10. 29.466448, 2021 | 1 | 2021 |
| The post-septic peripheral myeloid compartment reveals unexpected diversity in myeloid-derived suppressor cells EL Barrios, JR Leary, DB Darden, JC Rincon, M Willis, VE Polcz, ... Frontiers in Immunology 15, 1355405, 2024 | | 2024 |
| Data-driven selection of analysis decisions in single-cell RNA-seq trajectory inference X Dong, JR Leary, C Yang, MA Brusko, TM Brusko, R Bacher bioRxiv, 2023 | | 2023 |
| Interpretable trajectory inference with single-cell Linear Adaptive Negative-binomial Expression (scLANE) testing JR Leary, R Bacher bioRxiv, 2023.12. 19.572477, 2023 | | 2023 |
| Tumor and Tumor Microenvironment Landscape After Neoadjuvant Chemotherapy in Pancreatic Ductal Adenocarcinoma J Kearney, P Kuhlers, A Morrison, S Maharry, J Leary, XL Peng, H Kim, ... ANNALS OF SURGICAL ONCOLOGY 28 (SUPPL 1), S23-S23, 2021 | | 2021 |
| Tumor ecosystem differences in 75 pancreatic ductal adenocarcinoma patients after neoadjuvant chemotherapy vs no neoadjuvant chemotherapy JF Kearney, PC Kuhlers, XL Peng, AB Morrison, SE Maharry, JR Leary, ... HPB 23, S454-S455, 2021 | | 2021 |
