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Alina Malyutina
Alina Malyutina
Verified email at helsinki.fi
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Year
SynergyFinder plus: toward better interpretation and annotation of drug combination screening datasets
S Zheng, W Wang, J Aldahdooh, A Malyutina, T Shadbahr, Z Tanoli, ...
Genomics, Proteomics and Bioinformatics 20 (3), 587-596, 2022
2112022
DrugComb: an integrative cancer drug combination data portal
B Zagidullin, J Aldahdooh, S Zheng, W Wang, Y Wang, J Saad, ...
Nucleic acids research 47 (W1), W43-W51, 2019
1692019
DEqMS: a method for accurate variance estimation in differential protein expression analysis
Y Zhu, LM Orre, YZ Tran, G Mermelekas, HJ Johansson, A Malyutina, ...
Molecular & Cellular Proteomics 19 (6), 1047-1057, 2020
1452020
Drug combination sensitivity scoring facilitates the discovery of synergistic and efficacious drug combinations in cancer
A Malyutina, MM Majumder, W Wang, A Pessia, CA Heckman, J Tang
PLoS computational biology 15 (5), e1006752, 2019
1282019
Drug Target Commons 2.0: a community platform for systematic analysis of drug–target interaction profiles
ZR Tanoli, Z Alam, M Vähä-Koskela, B Ravikumar, A Malyutina, A Jaiswal, ...
Database 2018, bay083, 2018
582018
Multi-parametric single cell evaluation defines distinct drug responses in healthy hematologic cells that are retained in corresponding malignant cell types
MM Majumder, AM Leppä, M Hellesøy, P Dowling, A Malyutina, ...
haematologica 105 (6), 1527, 2020
222020
Combined gene essentiality scoring improves the prediction of cancer dependency maps
W Wang, A Malyutina, A Pessia, J Saarela, CA Heckman, J Tang
EBioMedicine 50, 67-80, 2019
222019
SynergyFinder Plus: toward better interpretation and annotation of drug combination screening datasets. Genomics Proteomics Bioinform
S Zheng, W Wang, J Aldahdooh, A Malyutina, T Shadbahr, Z Tanoli
72022
Heterogeneous modulation of Bcl-2 family members and drug efflux mediate MCL-1 inhibitor resistance in multiple myeloma
A Bolomsky, JJ Miettinen, A Malyutina, A Besse, J Huber, S Fellinger, ...
Blood advances 5 (20), 4125-4139, 2021
72021
drda: An R package for dose-response data analysis
A Malyutina, J Tang, A Pessia
BioRxiv, 2021.06. 07.447323, 2021
32021
drda: An R package for dose-response data analysis using logistic functions
A Malyutina, J Tang, A Pessia
Journal of Statistical Software, 2023
22023
Discovery of novel methionine adenosyltransferase 2A (MAT2A) allosteric inhibitors by structure-based virtual screening
T Kalliokoski, H Kettunen, E Kumpulainen, E Kettunen, G Thieulin-Pardo, ...
Bioorganic & Medicinal Chemistry Letters 94, 129450, 2023
12023
Multi-Parametric Single Cell Profiling Defines Distinct Drug Responses in Healthy Hematological Cell Lineages That Are Retained in Corresponding Malignant Cell Types
MM Majumder, M Leppä, M Hellesoy, P Dowling, A Malyutina, D Bazou, ...
Blood 132, 264, 2018
12018
Resolving network clusters disparity based on dissimilarity measurements with nonmetric analysis of variance
A Malyutina, J Tang, A Amiryousefi
Iscience 26 (11), 2023
2023
P-104: Multi-omics data integration reveals molecular targets of carfilzomib resistance in multiple myeloma
J Huber, A Malyutina, A Bolomsky, N Zojer, M Schreder, A Schneller, ...
Clinical Lymphoma Myeloma and Leukemia 22, S92-S93, 2022
2022
Nonmetric ANOVA: a generic framework for analysis of variance on dissimilarity measures
A Malyutina, J Tang, A Amiryousefi
bioRxiv, 2021.11. 19.469283, 2021
2021
drda: An R package for dose-response data analysis
A Malyutina, J Tang, A Pessia
BioRxiv, 2021.06. 07.447323, 2021
2021
Corrigendum to ‘Combined gene essentiality scoring improves the prediction of cancer dependency maps’[EBioMedicine 50 (2019) 66–79]
W Wang, A Malyutina, A Pessia, J Saarela, CA Heckman, J Tang
EBioMedicine 51, 2020
2020
Combined gene essentiality scoring improves the prediction of cancer dependency maps (vol 50, pg 66, 2019)
W Wang, A Malyutina, A Pessia, J Saarela, CA Heckman, J Tang
EBIOMEDICINE 51, 2020
2020
Improving the consistency of functional genomics screens using molecular features-a multi-omics, pan-cancer study
W Wang, A Malyutina, A Pessia, CA Heckman, J Tang
bioRxiv, 322883, 2018
2018
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Articles 1–20