Quantification of differential transcription factor activity and multiomics-based classification into activators and repressors: diffTF I Berest, C Arnold, A Reyes-Palomares, G Palla, KD Rasmussen, H Giles, ... Cell reports 29 (10), 3147-3159. e12, 2019 | 103 | 2019 |
Remodeling of active endothelial enhancers is associated with aberrant gene-regulatory networks in pulmonary arterial hypertension A Reyes-Palomares, M Gu, F Grubert, I Berest, S Sa, M Kasowski, ... Nature communications 11 (1), 1673, 2020 | 63 | 2020 |
Hepatic leukemia factor is a novel leukemic stem cell regulator in DNMT3A, NPM1, and FLT3-ITD triple-mutated AML S Garg, A Reyes-Palomares, L He, A Bergeron, VP Lavallée, S Lemieux, ... Blood, The Journal of the American Society of Hematology 134 (3), 263-276, 2019 | 49 | 2019 |
Histamine: an undercover agent in multiple rare diseases? A Pino‐Ángeles, A Reyes‐Palomares, E Melgarejo, F Sánchez‐Jiménez Journal of cellular and molecular medicine 16 (9), 1947-1960, 2012 | 39 | 2012 |
GRaNIE and GRaNPA: inference and evaluation of enhancer‐mediated gene regulatory networks A Kamal, C Arnold, A Claringbould, R Moussa, NH Servaas, M Kholmatov, ... Molecular Systems Biology 19 (6), e11627, 2023 | 30* | 2023 |
What is known on angiogenesis‐related rare diseases? A systematic review of literature L Rodríguez‐Caso, A Reyes‐Palomares, F Sánchez‐Jiménez, ... Journal of Cellular and Molecular Medicine 16 (12), 2872-2893, 2012 | 25 | 2012 |
Regulatory cross-talk of mouse liver polyamine and methionine metabolic pathways: a systemic approach to its physiopathological consequences F Correa-Fiz, A Reyes-Palomares, I Fajardo, E Melgarejo, A Gutiérrez, ... Amino Acids 42, 577-595, 2012 | 25 | 2012 |
Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling A Reyes-Palomares, R Montañez, A Real-Chicharro, O Chniber, ... Bioinformatics 25 (6), 834-835, 2009 | 20 | 2009 |
A combined model of hepatic polyamine and sulfur amino acid metabolism to analyze S-adenosyl methionine availability A Reyes-Palomares, R Montañez, F Sánchez-Jiménez, MA Medina Amino Acids 42, 597-610, 2012 | 19 | 2012 |
Global analysis of the human pathophenotypic similarity gene network merges disease module components A Reyes-Palomares, R Rodriguez-Lopez, JAG Ranea, FS Jiménez, ... PLoS One 8 (2), e56653, 2013 | 16 | 2013 |
Modulation of host immune response during leishmania infantum natural infection: A whole-transcriptome analysis of the popliteal lymph nodes in dogs CR Sanz, G Miró, N Sevane, A Reyes-Palomares, S Dunner Frontiers in Immunology 12, 794627, 2022 | 15 | 2022 |
PhenUMA: a tool for integrating the biomedical relationships among genes and diseases R Rodríguez-López, A Reyes-Palomares, F Sánchez-Jiménez, ... BMC bioinformatics 15, 1-13, 2014 | 10 | 2014 |
First steps in computational systems biology: a practical session in metabolic modeling and simulation A Reyes‐Palomares, F Sánchez‐Jiménez, MÁ Medina Biochemistry and Molecular Biology Education 37 (3), 178-181, 2009 | 10 | 2009 |
Phenotype-loci associations in networks of patients with rare disorders: application to assist in the diagnosis of novel clinical cases A Bueno, R Rodríguez-López, A Reyes-Palomares, E Rojano, M Corpas, ... European Journal of Human Genetics 26 (10), 1451-1461, 2018 | 9 | 2018 |
kpath: integration of metabolic pathway linked data I Navas-Delgado, MJ García-Godoy, E Lopez-Camacho, M Rybinski, ... Database 2015, bav053, 2015 | 8 | 2015 |
Biocomputational resources useful for drug discovery against compartmentalized targets F Sanchez-Jimenez, A Reyes-Palomares, A A Moya-Garcia, J AG Ranea, ... Current Pharmaceutical Design 20 (2), 293-300, 2014 | 8 | 2014 |
Systematic identification of phenotypically enriched loci using a patient network of genomic disorders A Reyes-Palomares, A Bueno, R Rodríguez-López, MÁ Medina, ... BMC genomics 17, 1-14, 2016 | 7 | 2016 |
NeuroBooster Array: A Genome-Wide Genotyping Platform to Study Neurological Disorders Across Diverse Populations S Bandres-Ciga, F Faghri, E Majounie, MJ Koretsky, J Kim, KS Levine, ... medRxiv, 2023 | 4 | 2023 |
TRANSLATIONAL RESEARCH EM Rosenbluth, LM Wells, AE Sparks, BJ Van Voorhis, ... Human Reproduction 27 (2), ii344, 2012 | 3 | 2012 |
Roles of biogenic amines in emergent and rare diseases F Correa-Fiz, A Reyes-Palomares, MV Ruiz-Pérez, MA Medina, ... Biological aspects of biogenic amines and polyamine conjugates 16, 2009 | 3 | 2009 |