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VFDB: a reference database for bacterial virulence factors L Chen, J Yang, J Yu, Z Yao, L Sun, Y Shen, Q Jin Nucleic acids research 33 (suppl_1), D325-D328, 2005 | 1627 | 2005 |
KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies D Wang, Y Zhang, Z Zhang, J Zhu, J Yu Genomics, Proteomics and Bioinformatics 8 (1), 77-80, 2010 | 1402 | 2010 |
A Draft Sequence for the Genome of the Domesticated Silkworm (Bombyx mori) Biology Analysis Group, Q Xia, Z Zhou, C Lu, D Cheng, F Dai, B Li, ... Science 306 (5703), 1937-1940, 2004 | 1393 | 2004 |
A brief review on the mechanisms of miRNA regulation Y Cai, X Yu, S Hu, J Yu Genomics, Proteomics and Bioinformatics 7 (4), 147-154, 2009 | 1089 | 2009 |
KaKs_Calculator: calculating Ka and Ks through model selection and model averaging Z Zhang, J Li, XQ Zhao, J Wang, GKS Wong, J Yu Genomics, proteomics and bioinformatics 4 (4), 259-263, 2006 | 1062 | 2006 |
The Genomes of Oryza sativa: A History of Duplications J Yu, J Wang, W Lin, S Li, H Li, J Zhou, P Ni, W Dong, S Hu, C Zeng, ... PLoS biology 3 (2), e38, 2005 | 1024 | 2005 |
Identification of natural compounds with antiviral activities against SARS-associated coronavirus S Li, C Chen, H Zhang, H Guo, H Wang, L Wang, X Zhang, S Hua, J Yu, ... Antiviral research 67 (1), 18-23, 2005 | 739 | 2005 |
Genome sequence and genetic diversity of the common carp, Cyprinus carpio P Xu, X Zhang, X Wang, J Li, G Liu, Y Kuang, J Xu, X Zheng, L Ren, ... Nature genetics 46 (11), 1212-1219, 2014 | 667 | 2014 |
Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 Q Jin, Z Yuan, J Xu, Y Wang, Y Shen, W Lu, J Wang, H Liu, J Yang, ... Nucleic acids research 30 (20), 4432-4441, 2002 | 586 | 2002 |
PGAP: pan-genomes analysis pipeline Y Zhao, J Wu, J Yang, S Sun, J Xiao, J Yu Bioinformatics 28 (3), 416-418, 2012 | 509 | 2012 |
Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery F Yang, J Yang, X Zhang, L Chen, Y Jiang, Y Yan, X Tang, J Wang, ... Nucleic acids research 33 (19), 6445-6458, 2005 | 502 | 2005 |
A comprehensive survey on pretrained foundation models: A history from bert to chatgpt C Zhou, Q Li, C Li, J Yu, Y Liu, G Wang, K Zhang, C Ji, Q Yan, L He, ... arXiv preprint arXiv:2302.09419, 2023 | 412 | 2023 |
A Glimpse of Streptococcal Toxic Shock Syndrome from Comparative Genomics of S. suis 2 Chinese Isolates C Chen, J Tang, W Dong, C Wang, Y Feng, J Wang, F Zheng, X Pan, ... PloS one 2 (3), e315, 2007 | 390 | 2007 |
Pigs in sequence space: a 0.66 X coverage pig genome survey based on shotgun sequencing R Wernersson, MH Schierup, FG Jørgensen, J Gorodkin, F Panitz, ... BMC genomics 6, 1-7, 2005 | 375 | 2005 |
On the nature of human housekeeping genes J Zhu, F He, S Hu, J Yu Trends in genetics 24 (10), 481-484, 2008 | 361 | 2008 |
The rubber tree genome reveals new insights into rubber production and species adaptation C Tang, M Yang, Y Fang, Y Luo, S Gao, X Xiao, Z An, B Zhou, B Zhang, ... Nature plants 2 (6), 1-10, 2016 | 348 | 2016 |
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe KE Holt, S Baker, FX Weill, EC Holmes, A Kitchen, J Yu, V Sangal, ... Nature genetics 44 (9), 1056-1059, 2012 | 334 | 2012 |
The Complete Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L.) M Yang, X Zhang, G Liu, Y Yin, K Chen, Q Yun, D Zhao, IS Al-Mssallem, ... PloS one 5 (9), e12762, 2010 | 333 | 2010 |
Genome sequence of the date palm Phoenix dactylifera L IS Al-Mssallem, S Hu, X Zhang, Q Lin, W Liu, J Tan, X Yu, J Liu, L Pan, ... Nature communications 4 (1), 2274, 2013 | 321 | 2013 |