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Thomas-Otavio Peulen
Thomas-Otavio Peulen
University of California, San Francisco (UCSF)
Verified email at salilab.org - Homepage
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Cited by
Cited by
Year
A toolkit and benchmark study for FRET-restrained high-precision structural modeling
S Kalinin, T Peulen, S Sindbert, PJ Rothwell, S Berger, T Restle, ...
Nature methods 9 (12), 1218-1225, 2012
4542012
Diffusion of nanoparticles in a biofilm
TO Peulen, KJ Wilkinson
Environmental science & technology 45 (8), 3367-3373, 2011
4442011
Quantitative FRET studies and integrative modeling unravel the structure and dynamics of biomolecular systems
M Dimura, TO Peulen, CA Hanke, A Prakash, H Gohlke, CAM Seidel
Current opinion in structural biology 40, 163-185, 2016
1712016
FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices
E Lerner, A Barth, J Hendrix, B Ambrose, V Birkedal, SC Blanchard, ...
Elife 10, e60416, 2021
1682021
Guanylate binding proteins directly attack Toxoplasma gondii via supramolecular complexes
E Kravets, D Degrandi, Q Ma, TO Peulen, V Klümpers, S Felekyan, ...
Elife 5, e11479, 2016
1292016
Resolving dynamics and function of transient states in single enzyme molecules
H Sanabria, D Rodnin, K Hemmen, TO Peulen, S Felekyan, MR Fleissner, ...
Nature communications 11 (1), 1231, 2020
852020
Combining graphical and analytical methods with molecular simulations to analyze time-resolved FRET measurements of labeled macromolecules accurately
TO Peulen, O Opanasyuk, CAM Seidel
The Journal of Physical Chemistry B 121 (35), 8211-8241, 2017
752017
Triphosphate induced dimerization of human guanylate binding protein 1 involves association of the C-terminal helices: a joint double electron–electron resonance and FRET study
T Vöpel, CS Hengstenberg, TO Peulen, Y Ajaj, CAM Seidel, ...
Biochemistry 53 (28), 4590-4600, 2014
462014
Automated and optimally FRET-assisted structural modeling
M Dimura, TO Peulen, H Sanabria, D Rodnin, K Hemmen, CA Hanke, ...
Nature communications 11 (1), 5394, 2020
442020
Unraveling multi-state molecular dynamics in single-molecule FRET experiments. I. Theory of FRET-lines
A Barth, O Opanasyuk, TO Peulen, S Felekyan, S Kalinin, H Sanabria, ...
The Journal of Chemical Physics 156 (14), 2022
322022
Structural assemblies of the di-and oligomeric G-protein coupled receptor TGR5 in live cells: an MFIS-FRET and integrative modelling study
A Greife, S Felekyan, Q Ma, CGW Gertzen, L Spomer, M Dimura, ...
Scientific reports 6 (1), 36792, 2016
282016
Unraveling multi-state molecular dynamics in single-molecule FRET experiments. II. Quantitative analysis of multi-state kinetic networks
O Opanasyuk, A Barth, TO Peulen, S Felekyan, S Kalinin, H Sanabria, ...
The Journal of Chemical Physics 157 (3), 2022
132022
Integrative dynamic structural biology unveils conformers essential for the oligomerization of a large GTPase
TO Peulen, CS Hengstenberg, R Biehl, M Dimura, C Lorenz, A Valeri, ...
Elife 12, e79565, 2023
82023
Integration of software tools for integrative modeling of biomolecular systems
M Hancock, TO Peulen, B Webb, JS Fraser, PD Adams, A Sali
Biophysical Journal 121 (3), 31a, 2022
82022
Resolution of Maximum Entropy Method-Derived Posterior Conformational Ensembles of a Flexible System Probed by FRET and Molecular Dynamics Simulations
J Dittrich, M Popara, J Kubiak, M Dimura, B Schepers, N Verma, ...
Journal of chemical theory and computation 19 (8), 2389-2409, 2023
22023
High Precision FRET Reveals Dynamic Structures in the Drosophila Scaffold Protein Complex Stardust-DPATJ-DLin-7 Mediated by L27 Domains
A Renner, S Felekyan, H Sanabria, T Peulen, CAM Seidel, E Knust
Biophysical Journal 106 (2), 256a, 2014
22014
Struktur und Dynamik von Biomolekülen mit high precision-FRET
TO Peulen, CAM Seidel
BIOspektrum 17, 765-767, 2011
12011
Electoflotation of water containing Cd (II), Cu (II), and Pb (II) with aluminium electrodes
TO Peulen
12007
Unraveling multi-state molecular dynamics in single-molecule FRET experiments-Part I: Theory of FRET-lines 2
A Barth, O Opanasyuk, TO Peulen, S Felekyan, S Kalinin, H Sanabria, ...
1
DNA controls the dimerization of the human FoxP1 forkhead domain
N Kolimi, J Ballard, T Peulen, R Goutam, FX Duffy, CA Ramírez-Sarmiento, ...
Cell Reports Physical Science, 2024
2024
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