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Aleksandra Karolak
Aleksandra Karolak
Assistant Professor, Moffitt Cancer Center, USA
Verified email at moffitt.org
Title
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Cited by
Year
Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues
A Karolak, DA Markov, LJ McCawley, KA Rejniak
Journal of The Royal Society Interface 15 (138), 20170703, 2018
1152018
Microenvironmental Niches and Sanctuaries: a Route to Acquired Resistance
J Pérez-Velázquez, JL Gevertz, A Karolak, KA Rejniak
Systems Biology of Tumor Microenvironment, Quantitative Modeling and Simulations, 2016
262016
Morphophenotypic classification of tumor organoids as an indicator of drug exposure and penetration potential
A Karolak, S Poonja, KA Rejniak
PLoS Computational Biology 15 (7), e1007214, 2019
252019
Enhanced sampling simulations of DNA step parameters
A Karolak, A van der Vaart
Journal of Computational Chemistry 35 (32), 2297-2304, 2014
192014
Micropharmacology: an in silico approach for assessing drug efficacy within a tumor tissue
A Karolak, KA Rejniak
Bulletin of mathematical biology 81 (9), 3623-3641, 2019
182019
Importance of local interactions for the stability of inhibitory helix 1 in apo Ets-1
A Karolak, A van der Vaart
Biophysical chemistry 165, 74-78, 2012
182012
Translation of AI into oncology clinical practice
I El Naqa, A Karolak, Y Luo, L Folio, AA Tarhini, D Rollison, K Parodi
Oncogene 42 (42), 3089-3097, 2023
142023
Targeting ligand specificity linked to tumor tissue topological heterogeneity via single-cell micro-pharmacological modeling
A Karolak, VC Estrella, AS Huynh, T Chen, J Vagner, DL Morse, ...
Scientific reports 8 (1), 3638, 2018
142018
Concepts and applications of information theory to immuno-oncology
A Karolak, S Branciamore, JS McCune, PP Lee, AS Rodin, RC Rockne
Trends in cancer 7 (4), 335-346, 2021
132021
Structure and properties of DOTA-chelated radiopharmaceuticals within the 225 Ac decay pathway
AR Khabibullin, A Karolak, MM Budzevich, ML McLaughlin, DL Morse, ...
Medchemcomm 9 (7), 1155-1163, 2018
132018
Photoacoustic calorimetry study of ligand photorelease from the Ru (II) bis (2, 2′-bipyridine)(6, 6′-dimethyl-2, 2′-bipyridine) complex in aqueous solution
TA Word, CL Whittington, A Karolak, MT Kemp, HL Woodcock, ...
Chemical Physics Letters 619, 214-218, 2015
72015
From isothiocyanato–to silyl–nickel complexes
H Maciejewski, B Marciniec, J Gulinski, A Karolak, NK Skvortsov
Inorganic Chemistry Communications 5 (7), 464-467, 2002
72002
Molecular dynamics simulations of membrane-bound STIM1 to investigate conformational changes during STIM1 activation upon calcium release
S Mukherjee, A Karolak, M Debant, P Buscaglia, Y Renaudineau, ...
Journal of Chemical Information and Modeling 57 (2), 335-344, 2017
62017
Pharmacometabonomic association of cyclophosphamide 4‐hydroxylation in hematopoietic cell transplant recipients
JS McCune, R Nakamura, D O’Meally, TW Randolph, BM Sandmaier, ...
Clinical and translational science 15 (5), 1215-1224, 2022
52022
Single-cell-based in silico models: a tool for dissecting tumor heterogeneity
A Karolak, S Agrawal, S Lee, KA Rejniak
Elsevier, 2019
52019
Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues. JR Soc Interface. 2018; 15 (138)
A Karolak, DA Markov, LJ McCawley, KA Rejniak
Epub 2018/01/26. doi: 10.1098/rsif. 2017.0703. PubMed PMID: 29367239, 2017
52017
A framework for mutational signature analysis based on DNA shape parameters
A Karolak, J Levatić, F Supek
Plos one 17 (1), e0262495, 2022
42022
Mathematical modeling of tumor organoids: toward personalized medicine
A Karolak, KA Rejniak
Tumor organoids, 193-213, 2018
42018
Enhancing synergy of CAR T cell therapy and oncolytic virus therapy for pancreatic cancer
R Walker, PE Navas, SH Friedman, S Galliani, A Karolak, F Macfarlane, ...
bioRxiv, 055988, 2016
42016
BII stability and base step flexibility of N6-adenine methylated GATC motifs
A Karolak, A van der Vaart
Biophysical Chemistry 203, 22-27, 2015
42015
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