NASH limits anti-tumour surveillance in immunotherapy-treated HCC D Pfister, NG Núñez, R Pinyol, O Govaere, M Pinter, M Szydlowska, ... Nature 592 (7854), 450-456, 2021 | 771 | 2021 |
Deterministic scRNA-seq captures variation in intestinal crypt and organoid composition J Bues, M Biočanin, J Pezoldt, R Dainese, A Chrisnandy, S Rezakhani, ... Nature Methods 19 (3), 323-330, 2022 | 42* | 2022 |
Intestinal B cells license metabolic T-cell activation in NASH microbiota/antigen-independently and contribute to fibrosis by IgA-FcR signalling E Kotsiliti, V Leone, S Schuehle, O Govaere, H Li, MJ Wolf, H Horvatic, ... Journal of hepatology 79 (2), 296-313, 2023 | 18 | 2023 |
psupertime: supervised pseudotime analysis for time-series single-cell RNA-seq data W Macnair, R Gupta, M Claassen Bioinformatics 38 (Supplement_1), i290-i298, 2022 | 14 | 2022 |
Simulation-based inference of differentiation trajectories from rna velocity fields R Gupta, D Cerletti, G Gut, A Oxenius, M Claassen Cell Reports Methods 2 (12), 2022 | 10* | 2022 |
Fate trajectories of CD8+ T cells in chronic LCMV infection D Cerletti, I Sandu, R Gupta, A Oxenius, M Claassen bioRxiv, 2020.12. 22.423929, 2020 | 5 | 2020 |
Immunosuppressive CD29+ Treg accumulation in the liver in mice on checkpoint inhibitor therapy BL Green, Y Myojin, C Ma, B Ruf, L Ma, Q Zhang, U Rosato, J Qi, ... Gut 73 (3), 509-520, 2024 | 1 | 2024 |
Factorial state-space modelling for kinetic clustering and lineage inference R Gupta, M Claassen bioRxiv, 2023.08. 21.554135, 2023 | 1 | 2023 |
Machine learning models of cell differentiation processes with single-cell transcriptomic measurements R Gupta Universität Tübingen, 2023 | | 2023 |