Yuping Chen

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Bruce FutcherProfessor of Molecular Genetics and Microbiology, Stony Brook UniversityVerified email at stonybrook.edu
James FerrellStanford University School of MedicineVerified email at stanford.edu
Steven SkienaProfessor of Computer Science, Stony Brook UniversityVerified email at cs.stonybrook.edu
Ruhul Amin, PhDComputer and Information Sciences, Fordham UniversityVerified email at fordham.edu
Alisa YurovskyStony Brook UniverstyVerified email at stonybrook.edu
Lucas CareyGinkgo BioworksVerified email at pku.edu.cn
Jakub ZahumenskýInstitute of Experimental Medicine, CASVerified email at iem.cas.cz
Justin GardinStony Brook UniversityVerified email at stonybrook.edu
Jo-Hsi HuangGraduate student, Stanford UniversityVerified email at stanford.edu
William Y. C. HuangAssistant Professor, Johns Hopkins UniversityVerified email at jhu.edu

Yuping Chen

Stanford University

Verified email at stanford.edu - Homepage

Cell cycle Gene expression Systems biology Genetic conflict


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Cyclin-dependent kinase co-ordinates carbohydrate metabolism and cell cycle in S. cerevisiae G Zhao, Y Chen, L Carey, B Futcher Molecular cell 62 (4), 546-557, 2016	85	2016
Differential scaling of gene expression with cell size may explain size control in budding yeast Y Chen, G Zhao, J Zahumensky, S Honey, B Futcher Molecular cell 78 (2), 359-370. e6, 2020	56	2020
Re-annotation of 12,495 prokaryotic 16S rRNA 3’ends and analysis of Shine-Dalgarno and anti-Shine-Dalgarno sequences MR Amin, A Yurovsky, Y Chen, S Skiena, B Futcher PloS one 13 (8), e0202767, 2018	30	2018
Scaling gene expression for cell size control and senescence in Saccharomyces cerevisiae Y Chen, B Futcher Current Genetics 67 (1), 41-47, 2021	14	2021
Prokaryotic coding regions have little if any specific depletion of Shine-Dalgarno motifs A Yurovsky, MR Amin, J Gardin, Y Chen, S Skiena, B Futcher PloS one 13 (8), e0202768, 2018	13	2018
C. elegans colony formation as a condensation phenomenon Y Chen, JE Ferrell Jr Nature Communications 12 (1), 4947, 2021	10	2021
Assaying Glycogen and Trehalose in Yeast Y Chen, B Futcher Bio-protocol 7 (13), e2371, 2017	10	2017
Protein homeostasis from diffusion-dependent control of protein synthesis and degradation Y Chen, JH Huang, C Phong, JE Ferrell Jr bioRxiv, 2023.04. 24.538146, 2023	3	2023
Robust trigger wave speed in Xenopus cytoplasmic extracts JH Huang, Y Chen, WYC Huang, S Tabatabaee, JE Ferrell Jr bioRxiv, 2023.12. 22.573127, 2023	1	2023
Viscosity-dependent control of protein synthesis and degradation Y Chen, JH Huang, C Phong, JE Ferrell Jr Nature Communications 15 (1), 2149, 2024		2024

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