agriGO: a GO analysis toolkit for the agricultural community Z Du, X Zhou, Y Ling, Z Zhang, Z Su Nucleic acids research 38 (suppl_2), W64-W70, 2010 | 2497 | 2010 |
agriGO v2. 0: a GO analysis toolkit for the agricultural community, 2017 update T Tian, Y Liu, H Yan, Q You, X Yi, Z Du, W Xu, Z Su Nucleic acids research 45 (W1), W122-W129, 2017 | 1847 | 2017 |
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer Z Du, T Fei, RGW Verhaak, Z Su, Y Zhang, M Brown, Y Chen, XS Liu Nature structural & molecular biology 20 (7), 908-913, 2013 | 569 | 2013 |
Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer Z Du, T Sun, E Hacisuleyman, T Fei, X Wang, M Brown, JL Rinn, MGS Lee, ... Nature communications 7 (1), 10982, 2016 | 295 | 2016 |
Long neural genes harbor recurrent DNA break clusters in neural stem/progenitor cells PC Wei, AN Chang, J Kao, Z Du, RM Meyers, FW Alt, B Schwer Cell 164 (4), 644-655, 2016 | 261 | 2016 |
Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability FL Meng, Z Du, A Federation, J Hu, Q Wang, KR Kieffer-Kwon, ... Cell 159 (7), 1538-1548, 2014 | 260 | 2014 |
PlantGSEA: a gene set enrichment analysis toolkit for plant community X Yi, Z Du, Z Su Nucleic acids research 41 (W1), W98-W103, 2013 | 255 | 2013 |
Induction of HIV neutralizing antibody lineages in mice with diverse precursor repertoires M Tian, C Cheng, X Chen, H Duan, HL Cheng, M Dao, Z Sheng, M Kimble, ... Cell 166 (6), 1471-1484. e18, 2016 | 218 | 2016 |
Sequence-intrinsic mechanisms that target AID mutational outcomes on antibody genes LS Yeap, JK Hwang, Z Du, RM Meyers, FL Meng, A Jakubauskaitė, M Liu, ... Cell 163 (5), 1124-1137, 2015 | 172 | 2015 |
Chromosomal loop domains direct the recombination of antigen receptor genes J Hu, Y Zhang, L Zhao, RL Frock, Z Du, RM Meyers, F Meng, DG Schatz, ... Cell 163 (4), 947-959, 2015 | 156 | 2015 |
Transcriptional landscape of the human cell cycle Y Liu, S Chen, S Wang, F Soares, M Fischer, F Meng, Z Du, C Lin, ... Proceedings of the National Academy of Sciences 114 (13), 3473-3478, 2017 | 136 | 2017 |
Genome-wide analysis of histone modifications: H3K4me2, H3K4me3, H3K9ac, and H3K27ac in Oryza sativa L. Japonica Z Du, H Li, Q Wei, X Zhao, C Wang, Q Zhu, X Yi, W Xu, XS Liu, W Jin, Z Su Molecular plant 6 (5), 1463-1472, 2013 | 120 | 2013 |
Transcription-associated processes cause DNA double-strand breaks and translocations in neural stem/progenitor cells B Schwer, PC Wei, AN Chang, J Kao, Z Du, RM Meyers, FW Alt Proceedings of the National Academy of Sciences 113 (8), 2258-2263, 2016 | 115 | 2016 |
Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching J Dong, RA Panchakshari, T Zhang, Y Zhang, J Hu, SA Volpi, RM Meyers, ... Nature 525 (7567), 134-139, 2015 | 109 | 2015 |
BCR selection and affinity maturation in Peyer’s patch germinal centres H Chen, Y Zhang, AY Ye, Z Du, M Xu, CS Lee, JK Hwang, N Kyritsis, Z Ba, ... Nature 582 (7812), 421-425, 2020 | 75 | 2020 |
plantsUPS: a database of plants' Ubiquitin Proteasome System Z Du, X Zhou, L Li, Z Su BMC genomics 10, 1-6, 2009 | 72 | 2009 |
DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions RA Panchakshari, X Zhang, V Kumar, Z Du, PC Wei, J Kao, J Dong, ... Proceedings of the National Academy of Sciences 115 (4), 762-767, 2018 | 66 | 2018 |
Highly sensitive and unbiased approach for elucidating antibody repertoires SG Lin, Z Ba, Z Du, Y Zhang, J Hu, FW Alt Proceedings of the National Academy of Sciences 113 (28), 7846-7851, 2016 | 60 | 2016 |
Sequence intrinsic somatic mutation mechanisms contribute to affinity maturation of VRC01-class HIV-1 broadly neutralizing antibodies JK Hwang, C Wang, Z Du, RM Meyers, TB Kepler, D Neuberg, PD Kwong, ... Proceedings of the National Academy of Sciences 114 (32), 8614-8619, 2017 | 51 | 2017 |
Three classes of recurrent DNA break clusters in brain progenitors identified by 3D proximity-based break joining assay PC Wei, CS Lee, Z Du, B Schwer, Y Zhang, J Kao, J Zurita, FW Alt Proceedings of the National Academy of Sciences 115 (8), 1919-1924, 2018 | 45 | 2018 |