| The role of conformational dynamics and allostery in modulating protein evolution P Campitelli, T Modi, S Kumar, SB Ozkan Annual review of biophysics 49, 267-288, 2020 | 114 | 2020 |
| Ancient thioredoxins evolved to modern day stability-function requirement by altering native state ensemble T Modi, J Huihui, K Ghosh, B Ozkan Biophysical Journal 114 (3), 231a, 2018 | 50 | 2018 |
| Hinge-shift mechanism as a protein design principle for the evolution of β-lactamases from substrate promiscuity to specificity T Modi, VA Risso, S Martinez-Rodriguez, JA Gavira, MD Mebrat, ... Nature communications 12 (1), 1852, 2021 | 39 | 2021 |
| Mutations utilize dynamic allostery to confer resistance in TEM-1 β-lactamase T Modi, SB Ozkan International journal of molecular sciences 19 (12), 3808, 2018 | 38 | 2018 |
| Protein folding stability and binding interactions through the lens of evolution: a dynamical perspective T Modi, P Campitelli, IC Kazan, SB Ozkan Current opinion in structural biology 66, 207-215, 2021 | 30 | 2021 |
| Statistical mechanics of DNA rupture: Theory and simulations S Nath, T Modi, RK Mishra, D Giri, BP Mandal, S Kumar The Journal of Chemical Physics 139 (16), 2013 | 14 | 2013 |
| Opening of DNA chain due to force applied on different locations A Singh, T Modi, N Singh Physical Review E 94 (3), 032410, 2016 | 10 | 2016 |
| On the rupture of DNA molecule RK Mishra, T Modi, D Giri, S Kumar The Journal of Chemical Physics 142 (17), 2015 | 9 | 2015 |
| Allostery modulates resistance driver mutations in TEM-1 T Modi, B Ozkan Biophysical Journal 116 (3), 342a, 2019 | 2 | 2019 |
| Vibrational density of states capture the role of dynamic allostery in protein evolution T Modi, M Heyden, SB Ozkan Biophysical Journal 121 (3), 456a, 2022 | 1 | 2022 |
| Information Propagation in Time through Allosteric Signaling T Modi, SB Ozkan, S Pressé Biophysical Journal 120 (3), 300a, 2021 | 1 | 2021 |
| RNA-induced Allosteric Coupling Drives Viral Capsid Assembly S Hamilton, T Modi, P Šulc, SB Ozkan PRX Life 2 (1), 013012, 2024 | | 2024 |
| Some mechanistic underpinnings of molecular adaptations of SARS-COV-2 spike protein by integrating candidate adaptive polymorphisms with protein dynamics NJ Ose, P Campitelli, T Modi, IC Kazan, S Kumar, SB Ozkan bioRxiv, 2023 | | 2023 |
| Correlated Evolution of Low-Frequency Vibrations and Function in Enzymes T Modi, P Campitelli, M Heyden, SB Ozkan The Journal of Physical Chemistry B 127 (3), 616-622, 2023 | | 2023 |
| RNA-induced allosteric coupling drives viral capsid assembly in bacteriophage MS2 S Hamilton, T Modi, P Sulc, SB Ozkan bioRxiv, 2023.06. 05.543665, 2023 | | 2023 |
| Information propagation in time through allosteric signaling T Modi, SB Ozkan, S Pressé Physical Review Research 2 (2), 023367, 2020 | | 2020 |
| What are the Design Principles for Evolution from Promiscuous to Substrate Specificity? T Modi, VA Risso, S Martinez-Rodriguez, JA Gavira, SB Ozkan Biophysical Journal 118 (3), 205a, 2020 | | 2020 |
| Deciphering Allosteric Interactions and Their Role in Protein Dynamics and Function T Modi Arizona State University, 2020 | | 2020 |
| Intrinsically Disordered Protein Dynamics Uncovered through Dynamic Flexibility Index (DFI) Analysis T Modi, GH Zerze, J Mittal, SM Vaiana, SB Ozkan Biophysical Journal 112 (3), 208a-209a, 2017 | | 2017 |
| Molecular origins of Protein-Protein Interactions: Dynamic Flexibility of Interface T Modi, B Ozkan Bulletin of the American Physical Society 60, 2015 | | 2015 |
