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James T Webber
James T Webber
Broad Institute
Verified email at broadinstitute.org
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Cited by
Year
Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris: The Tabula Muris Consortium
N Schaum, J Karkanias, NF Neff, AP May, SR Quake, T Wyss-Coray, ...
Nature 562 (7727), 367, 2018
1249*2018
Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins
O Rozenblatt-Rosen, RC Deo, M Padi, G Adelmant, MA Calderwood, ...
Nature 487 (7408), 491-495, 2012
4152012
Ageing hallmarks exhibit organ-specific temporal signatures
N Schaum, B Lehallier, O Hahn, R Pálovics, S Hosseinzadeh, SE Lee, ...
Nature 583 (7817), 596-602, 2020
3592020
Isocitrate dehydrogenase mutations confer dasatinib hypersensitivity and SRC dependence in intrahepatic cholangiocarcinoma
SK Saha, JD Gordan, BP Kleinstiver, P Vu, MS Najem, JC Yeo, L Shi, ...
Cancer discovery 6 (7), 727-739, 2016
144*2016
Online nanoflow multidimensional fractionation for high efficiency phosphopeptide analysis
SB Ficarro, Y Zhang, MJ Carrasco-Alfonso, B Garg, G Adelmant, ...
Molecular & Cellular Proteomics 10 (11), 2011
1062011
Synthetic Lethal Targeting of ARID1A-Mutant Ovarian Clear Cell Tumors with Dasatinib
RE Miller, R Brough, I Bajrami, CT Williamson, S McDade, J Campbell, ...
Molecular cancer therapeutics 15 (7), 1472-1484, 2016
952016
Kinome rewiring reveals AURKA limits PI3K-pathway inhibitor efficacy in breast cancer
HJ Donnella, JT Webber, RS Levin, R Camarda, O Momcilovic, N Bayani, ...
Nature chemical biology 14 (8), 768-777, 2018
882018
Oncogene mimicry as a mechanism of primary resistance to BRAF inhibitors
ML Sos, RS Levin, JD Gordan, JA Oses-Prieto, JT Webber, M Salt, ...
Cell reports 8 (4), 1037-1048, 2014
872014
Nanoflow low pressure high peak capacity single dimension LC-MS/MS platform for high-throughput, in-depth analysis of mammalian proteomes
F Zhou, Y Lu, SB Ficarro, JT Webber, JA Marto
Analytical chemistry 84 (11), 5133-5139, 2012
752012
multiplierz: an extensible API based desktop environment for proteomics data analysis
JR Parikh, M Askenazi, SB Ficarro, T Cashorali, JT Webber, NC Blank, ...
BMC bioinformatics 10, 1-16, 2009
752009
Online nanoflow reversed phase-strong anion exchange-reversed phase liquid chromatography–tandem mass spectrometry platform for efficient and in-depth proteome sequence …
F Zhou, TW Sikorski, SB Ficarro, JT Webber, JA Marto
Analytical chemistry 83 (18), 6996-7005, 2011
742011
Identification of a polymorphism in the N gene of SARS-CoV-2 that adversely impacts detection by reverse transcription-PCR
M Vanaerschot, SA Mann, JT Webber, J Kamm, SM Bell, J Bell, SN Hong, ...
Journal of Clinical Microbiology 59 (1), 10.1128/jcm. 02369-20, 2020
682020
Unbiased proteomic profiling uncovers a targetable GNAS/PKA/PP2A axis in small cell lung cancer stem cells
GL Coles, S Cristea, JT Webber, RS Levin, SM Moss, A He, J Sangodkar, ...
Cancer Cell 38 (1), 129-143. e7, 2020
662020
C/EBPα and DEK coordinately regulate myeloid differentiation
RI Koleva, SB Ficarro, HS Radomska, MJ Carrasco-Alfonso, JA Alberta, ...
Blood, The Journal of the American Society of Hematology 119 (21), 4878-4888, 2012
612012
Molecular hallmarks of heterochronic parabiosis at single-cell resolution
R Pálovics, A Keller, N Schaum, W Tan, T Fehlmann, M Borja, F Kern, ...
Nature 603 (7900), 309-314, 2022
602022
An optimized chromatographic strategy for multiplexing in parallel reaction monitoring mass spectrometry: insights from quantitation of activated kinases
A Urisman, RS Levin, JD Gordan, JT Webber, H Hernandez, Y Ishihama, ...
Molecular & Cellular Proteomics 16 (2), 265-277, 2017
392017
Rapid deployment of SARS-CoV-2 testing: The CLIAHUB
ED Crawford, I Acosta, V Ahyong, EC Anderson, S Arevalo, D Asarnow, ...
PLoS pathogens 16 (10), e1008966, 2020
222020
The cell type composition of the adult mouse brain revealed by single cell and spatial genomics
J Langlieb, NS Sachdev, KS Balderrama, NM Nadaf, M Raj, E Murray, ...
bioRxiv, 2023
212023
Integration of tumor genomic data with cell lines using multi-dimensional network modules improves cancer pharmacogenomics
JT Webber, S Kaushik, S Bandyopadhyay
Cell systems 7 (5), 526-536. e6, 2018
212018
Molecular cross-validation for single-cell RNA-seq
J Batson, L Royer, J Webber
BioRxiv, 786269, 2019
202019
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