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Zachary Ardern
Zachary Ardern
Postdoctoral Fellow (SEED), Wellcome Sanger Institute, Cambridge, UK
Bestätigte E-Mail-Adresse bei sanger.ac.uk - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic
CW Nelson, Z Ardern, TL Goldberg, C Meng, CH Kuo, C Ludwig, ...
Elife 9, e59633, 2020
1002020
Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution
I Jungreis, CW Nelson, Z Ardern, Y Finkel, NJ Krogan, K Sato, J Ziebuhr, ...
Virology 558, 145-151, 2021
482021
Discovery of numerous novel small genes in the intergenic regions of the Escherichia coli O157:H7 Sakai genome
SM Hücker, Z Ardern, T Goldberg, A Schafferhans, M Bernhofer, ...
PloS one 12 (9), e0184119, 2017
302017
Are antisense proteins in prokaryotes functional?
Z Ardern, K Neuhaus, S Scherer
Frontiers in molecular biosciences 7, 187, 2020
242020
OLGenie: estimating natural selection to predict functional overlapping genes
CW Nelson, Z Ardern, X Wei
Molecular Biology and Evolution 37 (8), 2440-2449, 2020
242020
The novel EHEC gene asa overlaps the TEGT transporter gene in antisense and is regulated by NaCl and growth phase
S Vanderhaeghen, B Zehentner, S Scherer, K Neuhaus, Z Ardern
Scientific reports 8 (1), 17875, 2018
242018
Recommendations for bacterial ribosome profiling experiments based on bioinformatic evaluation of published data
A Glaub, C Huptas, K Neuhaus, Z Ardern
Journal of Biological Chemistry 295 (27), 8999-9011, 2020
232020
Optimality in the standard genetic code is robust with respect to comparison code sets
S Wichmann, Z Ardern
Biosystems 185, 104023, 2019
232019
A novel pH-regulated, unusual 603 bp overlapping protein coding gene pop is encoded antisense to ompA in Escherichia coli O157: H7 (EHEC)
B Zehentner, Z Ardern, M Kreitmeier, S Scherer, K Neuhaus
Frontiers in microbiology 11, 471910, 2020
152020
Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection
M Kreitmeier, Z Ardern, M Abele, C Ludwig, S Scherer, K Neuhaus
Iscience 25 (2), 2022
12*2022
Evidence for Numerous Embedded Antisense Overlapping Genes in Diverse E. coli Strains
B Zehentner, Z Ardern, M Kreitmeier, S Scherer, K Neuhaus
bioRxiv, 2020.11. 18.388249, 2020
102020
Biological factors in the synthetic construction of overlapping genes
S Wichmann, S Scherer, Z Ardern
BMC genomics 22, 1-17, 2021
7*2021
Dysfunction, disease, and the limits of selection
Z Ardern
Biological Theory 13 (1), 4-9, 2018
62018
Elucidating the functional roles of prokaryotic proteins using big data and artificial intelligence
Z Ardern, S Chakraborty, F Lenk, AK Kaster
FEMS Microbiology Reviews 47 (1), fuad003, 2023
42023
Small proteins: overcoming size restrictions
Z Ardern
Nature Reviews Microbiology 20 (2), 65-65, 2022
32022
Alternative reading frames are an underappreciated source of protein sequence novelty
Z Ardern
Journal of Molecular Evolution 91 (5), 570-580, 2023
22023
Highly similar average collateral effect of synonymous mutations across alternative reading frames: a potential role in evolvability
S Wichmann, Z Ardern
BioCosmos 3 (1), 1-11, 2023
1*2023
THE CONTENTIOUS COMPATIBILITY OF EVOLUTION AND DESIGN: INTRODUCTION TO THE BOOK SYMPOSIUM: with Zachary Ardern,“The Contentious Compatibility of Evolution and Design …
Z Ardern
Zygon® 57 (4), 1019-1023, 2022
12022
SARS-CoV-2: don't ignore non-canonical genes
Z Ardern, X Wei, WC Nelson
12021
Investigating trade-offs in sexual populations with gene flow
ZN Ardern, MR Goddard
Evolutionary Biology: Biodiversification from Genotype to Phenotype, 245-262, 2015
12015
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