| Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must K Sirén, SST Mak, C Melkonian, C Carøe, JH Swiegers, D Molenaar, ... Frontiers in Microbiology 10, 697, 2019 | 33 | 2019 |
| Methanotrophy by a Mycobacterium species that dominates a cave microbial ecosystem RJM Van Spanning, Q Guan, C Melkonian, J Gallant, L Polerecky, JF Flot, ... Nature microbiology 7 (12), 2089-2100, 2022 | 25 | 2022 |
| Finding functional differences between species in a microbial community: case studies in wine fermentation and kefir culture C Melkonian, W Gottstein, S Blasche, Y Kim, M Abel-Kistrup, H Swiegers, ... Frontiers in Microbiology 10, 1347, 2019 | 25 | 2019 |
| New insights into cinnamoyl esterase activity of Oenococcus oeni I Collombel, C Melkonian, D Molenaar, FM Campos, T Hogg Frontiers in Microbiology 10, 489020, 2019 | 15 | 2019 |
| High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers C Melkonian, L Fillinger, S Atashgahi, UN da Rocha, E Kuiper, B Olivier, ... Communications biology 4 (1), 530, 2021 | 14* | 2021 |
| Ethanol-lactate transition of Lachancea thermotolerans is linked to nitrogen metabolism J Battjes, C Melkonian, SN Mendoza, A Haver, K Al-Nakeeb, A Koza, ... Food microbiology 110, 104167, 2023 | 9 | 2023 |
| Using functional annotations to study pairwise interactions in urinary tract infection communities EG Lara, I van der Windt, D Molenaar, MGJ de Vos, C Melkonian Genes 12 (8), 1221, 2021 | 7 | 2021 |
| Metabolic interactions shape a community's phenotype C Melkonian, MF Seidl, JJJ van der Hooft, MGJ de Vos Trends in Microbiology 30 (7), 609-611, 2022 | 6 | 2022 |
| Microbial interactions shape cheese flavour formation C Melkonian, F Zorrilla, I Kjærbølling, S Blasche, D Machado, M Junge, ... Nature Communications 14 (1), 8348, 2023 | 2 | 2023 |
| Improving genome-scale metabolic models of incomplete genomes with deep learning MD Boer, C Melkonian, H Zafeiropoulos, AF Haas, D Garza, BE Dutilh bioRxiv, 2023.07. 10.548314, 2023 | 1 | 2023 |
| Inter-species metabolic interactions in cheese flavour formation C Melkonian, F Zorrilla, I Kjærbølling, S Blasche, D Machado, M Junge, ... | 1 | 2023 |
| A simple coloring method to distinguish colonies of the yeasts Lachancea thermotolerans and Saccharomyces cerevisiae on agar media C Melkonian, A Haver, M Wagner, Z Kalmoua, AS Hellmuth, SN Mendoza, ... bioRxiv, 2021.03. 15.434753, 2021 | 1 | 2021 |
| Package ‘apcluster’ U Bodenhofer, J Palme, C Melkonian, A Kothmeier, N Kostic, ... | 1 | 2019 |
| A fast method to distinguish between fermentative and respiratory metabolisms in single yeast cells L Luzia, J Battjes, E Zwering, D Jansen, C Melkonian, B Teusink Iscience 27 (1), 2024 | | 2024 |
| Taxonomic resolution of different 16S rRNA variable regions varies strongly across plant-associated bacteria K Hrovat, BE Dutilh, MH Medema, C Melkonian ISME communications 4 (1), ycae034, 2024 | | 2024 |
| A Computational Odyssey into Microbial Communities Across Ecosystems C Melkonian | | 2021 |
| Similarity-based clustering of big data: A parallel ensemble variant of leveraged affinity propagation/submitted by: Chrats Melkonian C Melkonian | | 2015 |
| VU Research Portal C Melkonian, L Fillinger, S Atashgahi, UN da Rocha, E Kuiper, B Olivier, ... | | |
