FXR-dependent modulation of the human small intestinal microbiome by the bile acid derivative obeticholic acid ES Friedman, Y Li, TCD Shen, J Jiang, L Chau, L Adorini, F Babakhani, ... Gastroenterology 155 (6), 1741-1752. e5, 2018 | 120 | 2018 |
Bacterial colonization reprograms the neonatal gut metabolome K Bittinger, C Zhao, Y Li, E Ford, ES Friedman, J Ni, CV Kulkarni, J Cai, ... Nature Microbiology, 1-10, 2020 | 83 | 2020 |
An epigenetic signature in peripheral blood associated with the haplotype on 17q21. 31, a risk factor for neurodegenerative tauopathy Y Li, JA Chen, RL Sears, F Gao, ED Klein, A Karydas, MD Geschwind, ... PLoS genetics 10 (3), 2014 | 80 | 2014 |
Dynamic modular architecture of protein-protein interaction networks beyond the dichotomy of ‘date’and ‘party’hubs X Chang, T Xu, Y Li, K Wang Scientific reports 3, 1691, 2013 | 80 | 2013 |
A multiancestral genome-wide exome array study of Alzheimer disease, frontotemporal dementia, and progressive supranuclear palsy JA Chen, Q Wang, J Davis-Turak, Y Li, AM Karydas, SC Hsu, RL Sears, ... JAMA neurology 72 (4), 414-422, 2015 | 50 | 2015 |
Gene expression module-based chemical function similarity search Y Li, P Hao, S Zheng, K Tu, H Fan, R Zhu, G Ding, C Dong, C Wang, X Li, ... Nucleic acids research 36 (20), e137-e137, 2008 | 25 | 2008 |
Tree of life based on genome context networks G Ding, Z Yu, J Zhao, Z Wang, Y Li, X Xing, C Wang, L Liu, Y Li PLoS One 3 (10), 2008 | 25 | 2008 |
Maternal gut microbiota reflecting poor diet quality is associated with spontaneous preterm birth in a prospective cohort study V Gershuni, Y Li, M Elovitz, H Li, GD Wu, CW Compher The American Journal of Clinical Nutrition 113 (3), 602-611, 2021 | 23 | 2021 |
Coexpression network analysis identifies transcriptional modules associated with genomic alterations in neuroblastoma L Yang, Y Li, Z Wei, X Chang Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1864 (6 …, 2018 | 20 | 2018 |
Genetic correlations between COVID-19 and a variety of traits and diseases X Chang, Y Li, K Nguyen, H Qu, Y Liu, J Glessner, PMA Sleiman, ... The Innovation 2 (2), 100112, 2021 | 10 | 2021 |
A cross-species analysis method to analyze animal models' similarity to human's disease state S Yu, L Zheng, Y Li, C Li, C Ma, Y Li, X Li, P Hao BMC systems biology 6 (3), S18, 2012 | 7 | 2012 |
MPSQ: a web tool for protein-state searching S Zheng, J Sheng, C Wang, X Wang, Y Yu, Y Li, A Michie, J Dai, Y Zhong, ... Bioinformatics 24 (20), 2412-2413, 2008 | 7 | 2008 |
EcoBrowser: a web-based tool for visualizing transcriptome data of Escherichia coli X Chang, Y Li, J Ping, XB Xing, H Sun, P Jia, C Wang, YY Li, YX Li BMC research notes 4 (1), 405, 2011 | 6 | 2011 |
Weighted Gene Co-Expression Network Analysis Reveals Dysregulation of Mitochondrial Oxidative Phosphorylation in Eating Disorders L Yang, Y Li, T Turki, H Tan, Z Wei, X Chang Genes 9 (7), 325, 2018 | 4 | 2018 |
GEOGLE: context mining tool for the correlation between gene expression and the phenotypic distinction Y Yu, K Tu, S Zheng, Y Li, G Ding, J Ping, P Hao, Y Li BMC bioinformatics 10 (1), 264, 2009 | 4 | 2009 |
Association of feature gene expression with structural fingerprints of chemical compounds Y Li, K Tu, S Zheng, J Wang, Y Li, P Hao, X Li Journal of bioinformatics and computational biology 9 (04), 503-519, 2011 | 3 | 2011 |