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Ibai Irastorza Azcarate
Ibai Irastorza Azcarate
Postdoc in MDC - BISMB (Berlin)
Verified email at mdc-berlin.de - Homepage
Title
Cited by
Cited by
Year
A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation
RD Acemel, JJ Tena, I Irastorza-Azcarate, F Marlétaz, C Gómez-Marín, ...
Nature genetics 48 (3), 336-341, 2016
1292016
Cell-type specialization is encoded by specific chromatin topologies
W Winick-Ng, A Kukalev, I Harabula, L Zea-Redondo, D Szabó, M Meijer, ...
Nature 599 (7886), 684-691, 2021
1162021
The in vivo architecture of the exocyst provides structural basis for exocytosis
A Picco, I Irastorza-Azcarate, T Specht, D Böke, I Pazos, AS Rivier-Cordey, ...
Cell 168 (3), 400-412. e18, 2017
922017
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin
L Fiorillo, F Musella, M Conte, R Kempfer, AM Chiariello, S Bianco, ...
Nature methods 18 (5), 482-490, 2021
382021
CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression
M Franke, E De la Calle-Mustienes, A Neto, M Almuedo-Castillo, ...
Nature communications 12 (1), 5415, 2021
352021
Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements
C Vicente-Garcia, B Villarejo-Balcells, I Irastorza-Azcarate, S Naranjo, ...
Genome Biology 18, 1-18, 2017
282017
Age-related and disease locus-specific mechanisms contribute to early remodelling of chromatin structure in Huntington’s disease mice
R Alcalá-Vida, J Seguin, C Lotz, AM Molitor, I Irastorza-Azcarate, A Awada, ...
Nature communications 12 (1), 364, 2021
162021
Cell-type specialization in the brain is encoded by specific long-range chromatin topologies
W Winick-Ng, A Kukalev, I Harabula, LZ Redondo, D Szabo, M Meijer, ...
BioRxiv, 2020.04. 02.020990, 2020
102020
4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data
I Irastorza-Azcarate, RD Acemel, JJ Tena, I Maeso, JL Gómez-Skarmeta, ...
PLoS Computational Biology 14 (3), e1006030, 2018
102018
Comparison of the Hi-C, GAM and SPRITE methods by use of polymer models of chromatin
L Fiorillo, F Musella, R Kempfer, AM Chiariello, S Bianco, A Kukalev, ...
BioRxiv, 2020.04. 24.059915, 2020
82020
Comparison of the Hi-C
L Fiorillo, F Musella, R Kempfer, A Chiariello, S Bianco, A Kukalev, ...
GAM and SPRITE methods by use of polymer models of chromatin. bioRxiv 24, 2020, 2020
52020
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data
J Markowski, R Kempfer, A Kukalev, I Irastorza-Azcarate, G Loof, B Kehr, ...
Bioinformatics 37 (19), 3128-3135, 2021
42021
Live-cell structural biology to solve biological mechanisms: The case of the exocyst
I Irastorza-Azcarate, D Castaño-Díez, DP Devos, O Gallego
Structure 27 (6), 886-892, 2019
32019
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin (vol 18, pg 482, 2021)
L Fiorillo, F Musella, M Conte, R Kempfer, AM Chiariello, S Bianco, ...
NATURE METHODS 18 (10), 1266-1266, 2021
2021
Differential chromatin contacts between the parental alleles of the ESC genome and their role in pluripotency and imprinting.
R Kempfer, A Kukalev, G Loof, TM Sparks, C Thieme, RA Beagrie, ...
MOLECULAR BIOLOGY OF THE CELL 29 (26), 2018
2018
4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C dataGómez-Skarmeta
I Irastorza-Azcarate, RD Acemel, JJ Tena, I Maeso Martín, ...
PLoS Computational Biology, 2018, vol. 14, num. 3, 2018
2018
Modelado integrativo de la estructura 3d de macromoléculas./intregrative modeling of the 3d structure of macromolecules
I Irastorza-Azcarate
Modelado integrativo de la estructura 3d de macromoléculas./intregrative …, 2018
2018
Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements
CVG Villarejo-Balcells, I Irastorza-Azcarate, S Naranjo, RD Acemel, ...
Genome Biology 18, 2017
2017
3D chromatin organisation and enhancer-promoter specificity
C Vicente-García, M López-Mayorga, I Irastorza-Azcárate, JJ Tena, ...
Sociedad Española de Biología Celular, 2016
2016
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Articles 1–19