Starcode: sequence clustering based on all-pairs search E Zorita, P Cuscó, GJ Filion Bioinformatics 31 (12), 1913-1919, 2015 | 180 | 2015 |
Position effects influence HIV latency reversal HC Chen, JP Martinez, E Zorita, A Meyerhans, GJ Filion Nature structural & molecular biology 24 (1), 47-54, 2017 | 156 | 2017 |
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker, W Wang, ... Nature Communications 10 (1), 1-12, 2019 | 98 | 2019 |
The chromatin landscape at the HIV-1 provirus integration site determines viral expression G Vansant, HC Chen, E Zorita, K Trejbalová, D Miklík, G Filion, Z Debyser Nucleic Acids Research 48 (14), 7801-7817, 2020 | 54 | 2020 |
A new quinoline BRD4 inhibitor targets a distinct latent HIV-1 reservoir for reactivation from other “shock” drugs E Abner, M Stoszko, L Zeng, HC Chen, A Izquierdo-Bouldstridge, ... Journal of Virology 92 (10), 10.1128/jvi. 02056-17, 2018 | 52 | 2018 |
Space–frequency block coding for underwater acoustic communications EV Zorita, M Stojanovic IEEE Journal of Oceanic Engineering 40 (2), 303-314, 2014 | 52 | 2014 |
Chromosome compartments on the inactive X guide TAD formation independently of transcription during X-reactivation M Bauer, E Vidal, E Zorita, N Üresin, SF Pinter, GJ Filion, B Payer Nature Communications 12 (1), 1-21, 2021 | 37 | 2021 |
Using Barcoded HIV Ensembles (B‐HIVE) for Single Provirus Transcriptomics HC Chen, E Zorita, GJ Filion Current Protocols in Molecular Biology 122 (1), e56, 2018 | 15 | 2018 |
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration. Nat Commun 10: 4059 B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker, W Wang, ... | 6 | 2019 |
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker, V Roukos, ... BioRxiv, 287896, 2018 | 5 | 2018 |
Network-MIMO backhauling for QoS-constrained relay transmission J Vidal, A Agustín, S Lagén, E Valera, O Muñoz, AG Armada, ... 2011 IEEE International Conference on Acoustics, Speech and Signal …, 2011 | 5 | 2011 |
Space-frequency coded OFDM for underwater acoustic communications EV Zorita, M Stojanovic 2012 Oceans, 1-5, 2012 | 4 | 2012 |
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration. Nat Commun. 2019; 10: 4059 B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker | 3 | |
Calibrating seed-based alignment heuristics with Sesame GJ Filion, R Cortini, EV Zorita bioRxiv, 619155, 2019 | 2 | 2019 |
Network MIMO for downlink in-band relay transmissions with relaying phases of fixed duration A Agustin, J Vidal, S Lagen, E Valera 2011 19th European Signal Processing Conference, 1819-1823, 2011 | 2 | 2011 |
Mapping short reads, faithfully EV Zorita, R Cortini, GJ Filion BioRxiv, 2020.02. 10.942599, 2020 | 1 | 2020 |
Calibrating seed-based heuristics to map short reads with Sesame GJ Filion, R Cortini, E Zorita Frontiers in Genetics 11, 572, 2020 | 1 | 2020 |
Author Correction: Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker, W Wang, ... Nature Communications 12, 2021 | | 2021 |
HIV integration site selection affects transcription G Vansant, HC Chen, E Zorita, G Filion, Z Debyser CSHL retroviruses, Location: Cold Spring Harbor, New York, 2019 | | 2019 |
Calibrating seed-based heuristics to map short DNA reads GJ Filion, R Cortini, E Zorita bioRxiv, 619155, 2019 | | 2019 |