| Highly scalable generation of DNA methylation profiles in single cells RM Mulqueen, D Pokholok, SJ Norberg, KA Torkenczy, AJ Fields, D Sun, ... Nature biotechnology 36 (5), 428-431, 2018 | 228 | 2018 |
| Exonic mosaic mutations contribute risk for autism spectrum disorder DR Krupp, RA Barnard, Y Duffourd, SA Evans, RM Mulqueen, R Bernier, ... The American Journal of Human Genetics 101 (3), 369-390, 2017 | 185 | 2017 |
| The accessible chromatin landscape of the murine hippocampus at single-cell resolution JR Sinnamon, KA Torkenczy, MW Linhoff, SA Vitak, RM Mulqueen, ... Genome Research 29 (5), 857-869, 2019 | 64 | 2019 |
| Spatially mapped single-cell chromatin accessibility CA Thornton, RM Mulqueen, KA Torkenczy, A Nishida, EG Lowenstein, ... Nature communications 12 (1), 1274, 2021 | 59 | 2021 |
| High-content single-cell combinatorial indexing RM Mulqueen, D Pokholok, BL O’Connell, CA Thornton, F Zhang, ... Nature biotechnology 39 (12), 1574-1580, 2021 | 49 | 2021 |
| High-throughput robust single-cell DNA methylation profiling with sciMETv2 RV Nichols, BL O’Connell, RM Mulqueen, J Thomas, AR Woodfin, ... Nature communications 13 (1), 7627, 2022 | 18 | 2022 |
| Improved single-cell ATAC-seq reveals chromatin dynamics of in vitro corticogenesis RM Mulqueen, BA DeRosa, CA Thornton, Z Sayar, KA Torkenczy, ... bioRxiv, 637256, 2019 | 16 | 2019 |
| Single cell whole genome libraries for methylation sequencing AC Adey, R Mulqueen, FJ Steemers, DK Pokholok, S Norberg US Patent App. 16/000,505, 2018 | 14 | 2018 |
| Scalable and efficient single-cell DNA methylation sequencing by combinatorial indexing RM Mulqueen, D Pokholok, S Norberg, AJ Fields, D Sun, KA Torkenczy, ... BioRxiv, 157230, 2017 | 11 | 2017 |
| Estrogen regulates divergent transcriptional and epigenetic cell states in breast cancer A Ors, AD Chitsazan, AR Doe, RM Mulqueen, C Ak, Y Wen, S Haverlack, ... Nucleic acids research 50 (20), 11492-11508, 2022 | 7 | 2022 |
| Systematic benchmarking of single-cell ATAC-sequencing protocols FV De Rop, G Hulselmans, C Flerin, P Soler-Vila, A Rafels, V Christiaens, ... Nature biotechnology, 1-11, 2023 | 6 | 2023 |
| txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility H Zhang, RM Mulqueen, N Iannuzo, DO Farrera, F Polverino, JJ Galligan, ... Genome biology 25 (1), 78, 2024 | 2 | 2024 |
| Ten (10) X-compatible Combinatorial Indexing ATAC sequencing (txci-ATAC-seq) H Zhang, R Mulqueen, A Adey, D Cusanovich | | 2023 |
| Forebrain Organoids Model the Impact of Autism-Associated De Novo Mutations in TBR1 H Rudolph, F Sullivan, A Mar, R Mulqueen, BA DeRosa, A Adey, ... INSAR 2023, 2023 | | 2023 |
| Single-cell multiomics reveal divergent transcriptional and epigenetic cell states in breast cancer A Ors, H Mohammed, AR Doe, S Haverlack, M Handu, R Mulqueen Cancer Research 83 (7_Supplement), 5288-5288, 2023 | | 2023 |
| Crispr-mediated capture of nucleic acids BJ O'roak, A Andrew, T Mighell, R Mulqueen, C Thornton US Patent App. 17/753,592, 2022 | | 2022 |
| Methods for increasing yield of sequencing libraries AC Adey, R Mulqueen, F Steemers, DK Pokholok, F Zhang, ... US Patent App. 17/344,030, 2021 | | 2021 |
| sci-ATAC-seq HTAN A Adey, A Fields, C Th, R Mulqueen, S Vitak, E Juarez | | 2019 |
| AML Differentially Alters Fate and Function of Mesenchymal Stem-and Osteolineage Cells in the Leukemic Niche B Doron, S Abdelhamed, RM Mulqueen, J Burchard, A Adey, P Kurre Blood 130, 1197, 2017 | | 2017 |
| Utilizing Forebrain-like Organoids to Characterize the Impact of TBR1 De Novo Mutations on Regulation of Deep Layer Cortical Development at a Single-Cell Resolution BA DeRosa, R Mulqueen, A Nishida, C Thornton, K Torkenczy, A Fields, ... INSAR 2020 Virtual Meeting, 0 | | |
Andrew C AdeyProfessor of Molecular & Medical Genetics, Oregon Health & Science UniversityVerified email at ohsu.edu
