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Alvin Yu
Alvin Yu
Asst. Professor of Physiology and Biophysics at the University of California, Irvine
Verified email at uci.edu - Homepage
Title
Cited by
Cited by
Year
A multiscale coarse-grained model of the SARS-CoV-2 virion
A Yu, AJ Pak, P He, V Monje-Galvan, L Casalino, Z Gaieb, AC Dommer, ...
Biophysical journal 120 (6), 1097-1104, 2021
1522021
TRIM5α self-assembly and compartmentalization of the HIV-1 viral capsid
A Yu, KA Skorupka, AJ Pak, BK Ganser-Pornillos, O Pornillos, GA Voth
Nature communications 11 (1), 1307, 2020
612020
Glutamate and glycine binding to the NMDA receptor
A Yu, AY Lau
Structure 26 (7), 1035-1043. e2, 2018
602018
Temperature and phase transferable bottom-up coarse-grained models
J Jin, A Yu, GA Voth
Journal of chemical theory and computation 16 (11), 6823-6842, 2020
422020
Cooperative multivalent receptor binding promotes exposure of the SARS-CoV-2 fusion machinery core
AJ Pak, A Yu, Z Ke, JAG Briggs, GA Voth
Nature communications 13 (1), 1002, 2022
362022
Off-pathway assembly: a broad-spectrum mechanism of action for drugs that undermine controlled HIV-1 viral capsid formation
AJ Pak, JMA Grime, A Yu, GA Voth
Journal of the American Chemical Society 141 (26), 10214-10224, 2019
362019
Atomic-scale characterization of mature HIV-1 capsid stabilization by inositol hexakisphosphate (IP6)
A Yu, EMY Lee, J Jin, GA Voth
Science Advances 6 (38), eabc6465, 2020
332020
Molecular lock regulates binding of glycine to a primitive NMDA receptor
A Yu, R Alberstein, A Thomas, A Zimmet, R Grey, ML Mayer, AY Lau
Proceedings of the National Academy of Sciences 113 (44), E6786-E6795, 2016
312016
Neurotransmitter funneling optimizes glutamate receptor kinetics
A Yu, H Salazar, AJR Plested, AY Lau
Neuron 97 (1), 139-149. e4, 2018
252018
Strain and rupture of HIV-1 capsids during uncoating
A Yu, EMY Lee, JAG Briggs, BK Ganser-Pornillos, O Pornillos, GA Voth
Proceedings of the National Academy of Sciences 119 (10), e2117781119, 2022
192022
Energetics of glutamate binding to an ionotropic glutamate receptor
A Yu, AY Lau
The Journal of Physical Chemistry B 121 (46), 10436-10442, 2017
182017
Integrin-based mechanosensing through conformational deformation
TP Driscoll, TC Bidone, SJ Ahn, A Yu, A Groisman, GA Voth, MA Schwartz
Biophysical journal 120 (20), 4349-4359, 2021
132021
Stability and molecular pathways to the formation of spin defects in silicon carbide
EMY Lee, A Yu, JJ de Pablo, G Galli
Nature communications 12 (1), 6325, 2021
122021
Computing conformational free energies of iGluR ligand-binding domains
A Yu, T Wied, J Belcher, AY Lau
Ionotropic Glutamate Receptor Technologies, 119-132, 2016
62016
Phosphorylation at Ser65 modulates ubiquitin conformational dynamics
RA Yovanno, A Yu, TJ Wied, AY Lau
Structure 31 (7), 884-890. e2, 2023
12023
A multiscale coarse-grained model of HIV-1 capsid self-assembly
L Foglia, A Yu
Biophysical Journal 123 (3), 348a, 2024
2024
Coarse-grained (CG) simulations of HIV maturation within viral particles
A Khammari, H Song, E Wang, S Lee, A Yu
Biophysical Journal 123 (3), 345a-346a, 2024
2024
Atomic-level simulations of self-assembled icosahedral HIV-1 capsid variants
L Foglia, A Yu
Biophysical Journal 123 (3), 208a, 2024
2024
Atomistic simulations of Sec24c binding to the HIV capsid
DE Santos, L Foglia, A Yu
Biophysical Journal 123 (3), 338a, 2024
2024
Multiscale simulations of viruses
A Yu, EMY Lee, J Briggs, BK Ganser-Pornillos, O Pornillos, GA Voth
Biophysical Journal 121 (3), 330a, 2022
2022
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