| The impact of viral mutations on recognition by SARS-CoV-2 specific T cells TI de Silva, G Liu, BB Lindsey, D Dong, SC Moore, NS Hsu, D Shah, ... Iscience 24 (11), 2021 | 62 | 2021 |
| Emergence of immune escape at dominant SARS-CoV-2 killer T cell epitope G Dolton, C Rius, MS Hasan, A Wall, B Szomolay, E Behiry, T Whalley, ... Cell 185 (16), 2936-2951. e19, 2022 | 61 | 2022 |
| Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig K Tungatt, G Dolton, SB Morgan, M Attaf, A Fuller, T Whalley, JD Hemmink, ... PLoS pathogens 14 (5), e1007017, 2018 | 42 | 2018 |
| Viral molecular mimicry influences the antitumor immune response in murine and human melanoma J Chiaro, HHE Kasanen, T Whalley, C Capasso, M Grönholm, S Feola, ... Cancer immunology research 9 (8), 981-993, 2021 | 31 | 2021 |
| Macrophage and neutrophil interactions in the pancreatic tumor microenvironment drive the pathogenesis of pancreatic cancer HG Pratt, KJ Steinberger, NE Mihalik, S Ott, T Whalley, B Szomolay, ... Cancers 14 (1), 194, 2021 | 30 | 2021 |
| Molecular rules underpinning enhanced affinity binding of human T cell receptors engineered for immunotherapy RM Crean, BJ MacLachlan, F Madura, T Whalley, PJ Rizkallah, ... Molecular Therapy-Oncolytics 18, 443-456, 2020 | 12 | 2020 |
| CD4+ T cells recognize conserved influenza a epitopes through shared patterns of V-gene usage and complementary biochemical features A Greenshields-Watson, M Attaf, BJ MacLachlan, T Whalley, C Rius, ... Cell reports 32 (2), 2020 | 12 | 2020 |
| GPU-accelerated discovery of pathogen-derived molecular mimics of a T-cell insulin epitope T Whalley, G Dolton, PE Brown, A Wall, L Wooldridge, H Van den Berg, ... Frontiers in immunology 11, 296, 2020 | 12 | 2020 |
| The COVID-19 Genomics UK (COG-UK) consortium; et al G Dolton, C Rius, MS Hasan, A Wall, B Szomolay, E Behiry, T Whalley, ... Emergence of immune escape at dominant SARS-CoV-2 killer T-cell epitope. medRxiv, 2021 | 5 | 2021 |
| Bifidobacterium affects antitumor efficacy of oncolytic adenovirus in a mouse model of melanoma L Tripodi, S Feola, I Granata, T Whalley, M Passariello, C Capasso, ... Iscience 26 (10), 2023 | 3 | 2023 |
| Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes S Cotton, MP McHugh, R Dewar, JG Haas, K Templeton, SC Robson, ... Journal of Hospital Infection 135, 28-36, 2023 | 2 | 2023 |
| Analysis of single nuclear chromatin accessibility reveals unique myeloid populations in human pancreatic ductal adenocarcinoma HG Pratt, L Ma, SA Dziadowicz, S Ott, T Whalley, B Szomolay, TD Eubank, ... Clinical and Translational Medicine 14 (3), e1595, 2024 | | 2024 |
| Responses of Salmonella biofilms to oxidizing biocides: Evidence of spatial clustering K Guest, T Whalley, JY Maillard, A Artemiou, B Szomolay, MA Webber Environmental Microbiology 24 (12), 6426-6438, 2022 | | 2022 |
| Novel bioinformatics tools for epitope-based peptide vaccine design T Whalley Cardiff University, 2022 | | 2022 |
| Abstract B007: Identification of prostate cancer stem cell antigens for T-cell immunotherapy by HLA ligandome analysis AS Codd, S Al-Taei, S Tokita, E Mizushima, PJ Rizkallah, T Whalley, ... Cancer Immunology Research 7 (2_Supplement), B007-B007, 2019 | | 2019 |
| Homology between cancer and viral epitopes as criteria to design improved cancer vaccines C Capasso, T Whalley, VS Marwah, A Serafin, M Fusciello, S Feola, ... Annals of Oncology 28, xi18, 2017 | | 2017 |
| Genomics-informed outbreak investigations of SARS-CoV-2 using civet SC Robson, TR Connor, NJ Loman, T Golubchik, RTM Nunez, D Bonsall, ... | | |
