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Haoyang Mi
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Digital pathology analysis quantifies spatial heterogeneity of CD3, CD4, CD8, CD20, and FoxP3 immune markers in triple-negative breast cancer
H Mi, C Gong, J Sulam, EJ Fertig, AS Szalay, EM Jaffee, V Stearns, ...
Frontiers in physiology 11, 583333, 2020
502020
Quantitative Spatial Profiling of Immune Populations in Pancreatic Ductal Adenocarcinoma Reveals Tumor Microenvironment Heterogeneity and Prognostic Biomarkers
H Mi, S Sivagnanam, CB Betts, SM Liudahl, EM Jaffee, LM Coussens, ...
Cancer Research 82 (23), 4359–4372, 2022
342022
Multi-scale Spatial Analysis of the Tumor Microenvironment Reveals Features of Cabozantinib and Nivolumab Efficacy in Hepatocellular Carcinoma
H Mi, WJ Ho, M Yarchoan, AS Popel
Frontiers in Immunology 13, 1986, 2022
302022
Predictive models of response to neoadjuvant chemotherapy in muscle-invasive bladder cancer using nuclear morphology and tissue architecture
H Mi, TJ Bivalacqua, M Kates, R Seiler, PC Black, AS Popel, AS Baras
Cell Reports Medicine 2 (9), 2021
242021
Simulations of tumor growth and response to immunotherapy by coupling a spatial agent-based model with a whole-patient quantitative systems pharmacology model
A Ruiz-Martinez, C Gong, H Wang, RJ Sové, H Mi, H Kimko, AS Popel
PLoS computational biology 18 (7), e1010254, 2022
212022
Sparse multi-modal graph transformer with shared-context processing for representation learning of giga-pixel images
R Nakhli, PA Moghadam, H Mi, H Farahani, A Baras, B Gilks, ...
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2023
11*2023
Informing virtual clinical trials of hepatocellular carcinoma with spatial multi-omics analysis of a human neoadjuvant immunotherapy clinical trial
S Zhang, A Deshpande, BK Verma, H Wang, H Mi, L Yuan, WJ Ho, ...
bioRxiv, 2023
52023
Quantifying Intratumoral Heterogeneity and Immunoarchitecture Generated In-Silico by a Spatial Quantitative Systems Pharmacology Model
M Nikfar, H Mi, C Gong, H Kimko, AS Popel
Cancers 15 (10), 2750, 2023
42023
Integrating spatial multi-omics data with spatial quantitative pharmacology (spQSP) model to simulate human neoadjuvant immunotherapy clinical trial of hepatocellular carcinoma
S Zhang, A Deshpande, BK Verma, H Wang, H Mi, L Yuan, WJ Ho, ...
Cancer Research 84 (6_Supplement), 2312-2312, 2024
2024
Decoding the complete organelle genomic architecture of Stewartia gemmata: an early-diverging species in Theaceae
D Liu, Z Zhang, Y Hao, M Li, H Yu, X Zhang, H Mi, L Cheng, Y Zhao
BMC genomics 25 (1), 114, 2024
2024
Spatial and Compositional Biomarkers in Tumor Microenvironment Predicts Clinical Outcomes in Triple-Negative Breast Cancer
H Mi, R Varadhan, AM Cimino-Mathews, LA Emens, CA Santa-Maria, ...
bioRxiv, 2023.12. 18.572234, 2023
2023
A digital pathology platform to quantify the spatial heterogeneity and patterns of immune markers in pathology specimens from triple-negative breast cancer
H Mi
Johns Hopkins University, 2020
2020
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