| A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging NJ Sofroniew, D Flickinger, J King, K Svoboda elife 5, e14472, 2016 | 586 | 2016 |
| Mapping brain activity at scale with cluster computing J Freeman, N Vladimirov, T Kawashima, Y Mu, NJ Sofroniew, DV Bennett, ... Nature methods 11 (9), 941-950, 2014 | 300 | 2014 |
| napari: a multi-dimensional image viewer for Python N Sofroniew, T Lambert, K Evans, J Nunez-Iglesias, G Bokota, P Winston, ... Zenodo, 2022 | 191* | 2022 |
| Natural whisker-guided behavior by head-fixed mice in tactile virtual reality NJ Sofroniew, JD Cohen, AK Lee, K Svoboda Journal of Neuroscience 34 (29), 9537-9550, 2014 | 152 | 2014 |
| Community-based benchmarking improves spike rate inference from two-photon calcium imaging data P Berens, J Freeman, T Deneux, N Chenkov, T McColgan, A Speiser, ... PLoS computational biology 14 (5), e1006157, 2018 | 128 | 2018 |
| Neural coding in barrel cortex during whisker-guided locomotion NJ Sofroniew, YA Vlasov, SA Hires, J Freeman, K Svoboda Elife 4, e12559, 2015 | 116 | 2015 |
| REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology U Sarkans, W Chiu, L Collinson, MC Darrow, J Ellenberg, D Grunwald, ... Nature methods 18 (12), 1418-1422, 2021 | 79 | 2021 |
| Whisking NJ Sofroniew, K Svoboda Current Biology 25 (4), R137-R140, 2015 | 72 | 2015 |
| Standardizing and benchmarking data analysis for calcium imaging P Berens, L Theis, J Stone, N Sofroniew, A Tolias, M Bethge, J Freeman Computational and Systems Neuroscience Meeting (COSYNE 2017), 66-67, 2017 | 15 | 2017 |
| Large field of view, high resolution microscope K Svoboda, D Flickinger, N Sofroniew US Patent 10,295,811, 2019 | 9 | 2019 |
| Q&A: The brain under a mesoscope: the forest and the trees NJ Sofroniew BMC biology 15, 1-4, 2017 | 6 | 2017 |
| Investigation of neural coding in mice using tactile virtual reality NJ Sofroniew University of Cambridge, 2014 | | 2014 |
