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Parker Bremer
Parker Bremer
Verified email at ucdavis.edu - Homepage
Title
Cited by
Cited by
Year
Overcoming the Heuristic Nature of k-Means Clustering: Identification and Characterization of Binding Modes from Simulations of Molecular Recognition Complexes
PL Bremer, D De Boer, W Alvarado, X Martinez, EJ Sorin
Journal of Chemical Information and Modeling 60 (6), 3081-3092, 2020
142020
Understanding the enzyme–ligand complex: insights from all-atom simulations of butyrylcholinesterase inhibition
W Alvarado, PL Bremer, A Choy, HN Dinh, A Eung, J Gonzalez, P Ly, ...
Journal of Biomolecular Structure and Dynamics, 2019
112019
Quantum chemical prediction of electron ionization mass spectra of trimethylsilylated metabolites
S Wang, T Kind, PL Bremer, DJ Tantillo, O Fiehn
Analytical Chemistry 94 (3), 1559-1566, 2022
82022
The BinDiscover database: a biology-focused meta-analysis tool for 156,000 GC–TOF MS metabolome samples
PL Bremer, G Wohlgemuth, O Fiehn
Journal of Cheminformatics 15 (1), 66, 2023
72023
Beyond the ground state: Predicting electron ionization mass spectra using excited-state molecular dynamics
S Wang, T Kind, PL Bremer, DJ Tantillo, O Fiehn
Journal of Chemical Information and Modeling 62 (18), 4403-4410, 2022
62022
How well can we predict mass spectra from structures? Benchmarking competitive fragmentation modeling for metabolite identification on untrained tandem mass spectra
PL Bremer, A Vaniya, T Kind, S Wang, O Fiehn
Journal of Chemical Information and Modeling 62 (17), 4049-4056, 2022
62022
SMetaS: A Sample Metadata Standardizer for Metabolomics
PL Bremer, O Fiehn
Metabolites 13 (8), 941, 2023
2023
Improving Metabolomics Coverage and Standardization
PL Bremer
University of California, Davis, 2023
2023
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