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Colm J. Ryan
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ATR inhibitors as a synthetic lethal therapy for tumours deficient in ARID1A
CT Williamson, R Miller, HN Pemberton, SE Jones, J Campbell, A Konde, ...
Nature communications 7 (1), 1-13, 2016
3182016
Hierarchical modularity and the evolution of genetic interactomes across species
CJ Ryan, A Roguev, K Patrick, J Xu, H Jahari, Z Tong, P Beltrao, M Shales, ...
Molecular cell 46 (5), 691-704, 2012
2342012
Cells lacking the RB1 tumor suppressor gene are hyperdependent on Aurora B kinase for survival
MG Oser, R Fonseca, AA Chakraborty, R Brough, A Spektor, RB Jennings, ...
Cancer discovery 9 (2), 230-247, 2019
1382019
Large-scale profiling of kinase dependencies in cancer cell lines
J Campbell, CJ Ryan, R Brough, I Bajrami, HN Pemberton, IY Chong, ...
Cell reports 14 (10), 2490-2501, 2016
1182016
E-cadherin/ROS1 inhibitor synthetic lethality in breast cancer
I Bajrami, R Marlow, M van de Ven, R Brough, HN Pemberton, J Frankum, ...
Cancer discovery 8 (4), 498-515, 2018
1022018
High-resolution network biology: connecting sequence with function
CJ Ryan, P Cimermančič, ZA Szpiech, A Sali, RD Hernandez, NJ Krogan
Nature Reviews Genetics 14 (12), 865-879, 2013
972013
Synthetic lethality and cancer–penetrance as the major barrier
CJ Ryan, I Bajrami, CJ Lord
Trends in cancer 4 (10), 671-683, 2018
802018
The yeast SR-like protein Npl3 links chromatin modification to mRNA processing
EA Moehle, CJ Ryan, NJ Krogan, TL Kress, C Guthrie
PLoS genetics 8 (11), e1003101, 2012
752012
Paralog buffering contributes to the variable essentiality of genes in cancer cell lines
B De Kegel, CJ Ryan
PLoS genetics 15 (10), e1008466, 2019
692019
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D
SA Kennedy, MA Jarboui, S Srihari, C Raso, K Bryan, L Dernayka, ...
Nature communications 11 (1), 1-14, 2020
512020
Systematic triple-mutant analysis uncovers functional connectivity between pathways involved in chromosome regulation
JE Haber, H Braberg, Q Wu, R Alexander, J Haase, C Ryan, ...
Cell reports 3 (6), 2168-2178, 2013
492013
A compendium of co-regulated protein complexes in breast cancer reveals collateral loss events
CJ Ryan, S Kennedy, I Bajrami, D Matallanas, CJ Lord
Cell systems 5 (4), 399-409. e5, 2017
462017
Comprehensive prediction of robust synthetic lethality between paralog pairs in cancer cell lines
B De Kegel, N Quinn, NA Thompson, DJ Adams, CJ Ryan
Cell Systems 12 (12), 1144-1159. e6, 2021
452021
All or nothing: protein complexes flip essentiality between distantly related eukaryotes
CJ Ryan, NJ Krogan, P Cunningham, G Cagney
Genome biology and evolution 5 (6), 1049-1059, 2013
452013
Key functional regions in the histone variant H2A. Z C-terminal docking domain
AY Wang, MJ Aristizabal, C Ryan, NJ Krogan, MS Kobor
Molecular and cellular biology 31 (18), 3871-3884, 2011
412011
Integrative analysis of large-scale loss-of-function screens identifies robust cancer-associated genetic interactions
CJ Lord, N Quinn, CJ Ryan
Elife 9, e58925, 2020
382020
Chemical genetics of rapamycin-insensitive TORC2 in S. cerevisiae
JI Kliegman, D Fiedler, CJ Ryan, YF Xu, X Su, D Thomas, MC Caccese, ...
Cell reports 5 (6), 1725-1736, 2013
382013
Genetic interaction mapping reveals a role for the SWI/SNF nucleosome remodeler in spliceosome activation in fission yeast
KL Patrick, CJ Ryan, J Xu, JJ Lipp, KE Nissen, A Roguev, M Shales, ...
PLoS genetics 11 (3), e1005074, 2015
332015
DAISY: picking synthetic lethals from cancer genomes
CJ Ryan, CJ Lord, A Ashworth
Cancer cell 26 (3), 306-308, 2014
332014
Missing value imputation for epistatic MAPs
C Ryan, D Greene, G Cagney, P Cunningham
BMC bioinformatics 11 (1), 1-14, 2010
302010
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Articles 1–20