| Approximating the DCJ distance of balanced genomes in linear time DP Rubert, P Feijão, MDV Braga, J Stoye, FHV Martinez Algorithms for Molecular Biology 12, 1-13, 2017 | 14 | 2017 |
| Natural family-free genomic distance DP Rubert, FV Martinez, MDV Braga Algorithms for Molecular Biology 16 (1), 4, 2021 | 8 | 2021 |
| Gene orthology inference via large-scale rearrangements for partially assembled genomes DP Rubert, MDV Braga 22nd International Workshop on Algorithms in Bioinformatics (WABI 2022), 2022 | 6 | 2022 |
| The potential of family-free rearrangements towards gene orthology inference DP Rubert, D Doerr, MDV Braga Journal of Bioinformatics and Computational Biology 19 (06), 2140014, 2021 | 6 | 2021 |
| Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants DP Rubert, FV Martinez, J Stoye, D Doerr BMC genomics 21, 1-11, 2020 | 6 | 2020 |
| Computing the family-free DCJ similarity DP Rubert, EA Hoshino, MDV Braga, J Stoye, FV Martinez BMC bioinformatics 19, 31-42, 2018 | 4 | 2018 |
| A linear time approximation algorithm for the DCJ distance for genomes with bounded number of duplicates DP Rubert, P Feijão, MDV Braga, J Stoye, FV Martinez Algorithms in Bioinformatics: 16th International Workshop, WABI 2016, Aarhus …, 2016 | 4 | 2016 |
| SIMBio: Searching and inferring colorful motifs in biological networks DP Rubert, E Araujo, MA Stefanes 2015 IEEE 15th International Conference on Bioinformatics and Bioengineering …, 2015 | 3 | 2015 |
| Algorithms for normalized multiple sequence alignments E Araujo, L Rozante, DP Rubert, FV Martinez arXiv preprint arXiv:2107.01607, 2021 | 2 | 2021 |
| Algorithms for computing the family-free genomic similarity under DCJ DP Rubert, GL Medeiros, EA Hoshino, MDV Braga, J Stoye, FV Martinez Comparative Genomics: 15th International Workshop, RECOMB CG 2017, Barcelona …, 2017 | 2 | 2017 |
| Efficient gene orthology inference via large-scale rearrangements DP Rubert, MDV Braga Algorithms for Molecular Biology 18 (1), 14, 2023 | 1 | 2023 |
| Distance and Similarity Measures in Comparative Genomics DP Rubert, J Stoye, FHV Martinez Anais do XXXIII Concurso de Teses e Dissertações, 7-12, 2020 | 1 | 2020 |
| Scalable parallel algorithms for maximum matching and Hamiltonian circuit in convex bipartite graphs MA Stefanes, DP Rubert, J Soares Theoretical Computer Science 804, 58-71, 2020 | 1 | 2020 |
| Coarse grained parallel algorithm for hamiltonian circuit in convex bipartite graphs MA Stefanes, DP Rubert, J Soares Proceedings of the International Conference on Parallel and Distributed …, 2015 | 1 | 2015 |
| Family-Free Genome Comparison MDV Braga, D Doerr, DP Rubert, J Stoye Comparative Genomics: Methods and Protocols, 57-72, 2024 | | 2024 |
| Algorithms for the genome median under a restricted measure of rearrangement HOM Silva, DP Rubert, E Araujo, E Steffen, D Doerr, FV Martinez RAIRO-Operations Research 57 (3), 1045-1058, 2023 | | 2023 |
| Algorithms for a Restricted Genome Median Problem HOM Silva, DP Rubert, E Araujo, FV Martinez Encontro de Teoria da Computação (ETC), 45-48, 2022 | | 2022 |
| Searching and inferring colorful topological motifs in vertex-colored graphs DP Rubert, E Araujo, MA Stefanes, J Stoye, FV Martinez Journal of Combinatorial Optimization 40, 379-411, 2020 | | 2020 |
| On motifs in colored graphs DP Rubert, E Araujo, MA Stefanes, J Stoye, FV Martinez arXiv preprint arXiv:2005.13634, 2020 | | 2020 |
| Supplementary Data for" Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants" D Dörr, D Rubert | | 2019 |
Marilia D. V. BragaBielefeld UniversityVerified email at cebitec.uni-bielefeld.de
