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Priyanka Bhandary
Priyanka Bhandary
Research Bioinformatician II, Cedars-Sinai Medical Center
Verified email at cshs.org
Title
Cited by
Cited by
Year
FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences
S Banerjee, P Bhandary, M Woodhouse, TZ Sen, RP Wise, CM Andorf
BMC bioinformatics 22, 1-26, 2021
282021
Raising orphans from a metadata morass: A researcher's guide to re-use of public’omics data
P Bhandary, AS Seetharam, ZW Arendsee, M Hur, ES Wurtele
Plant science 267, 32-47, 2018
272018
Foster thy young: enhanced prediction of orphan genes in assembled genomes
J Li, U Singh, P Bhandary, J Campbell, Z Arendsee, AS Seetharam, ...
Nucleic Acids Research 50 (7), e37-e37, 2022
182022
fagin: synteny-based phylostratigraphy and finer classification of young genes
Z Arendsee, J Li, U Singh, P Bhandary, A Seetharam, ES Wurtele
BMC bioinformatics 20, 1-14, 2019
152019
Maximizing prediction of orphan genes in assembled genomes
A Seetharam, U Singh, J Li, P Bhandary, Z Arendsee, ES Wurtele
BioRxiv, 2019.12. 17.880294, 2019
82019
Computational framework for statistical epistasis supports XOR penetrance function in a living system
S Batista, VS Madar, PJ Freda, P Bhandary, A Ghosh, AS Chitre, ...
bioRxiv, 2023.05. 09.539940, 2023
12023
Heterologous Expression and Characterization of Plant Wax Ester Producing Enzymes
D Cheng, L Li, L Rizhsky, P Bhandary, BJ Nikolau
Metabolites 12 (7), 577, 2022
12022
A novel community detection method improves detection of functional gene modules in big gene expression data.
P Singh, J Guo, P Bhandary, E Wurtele, K Bassler
Bulletin of the American Physical Society, 2020
12020
Interaction models matter: an efficient, flexible computational framework for model-specific investigation of epistasis
S Batista, VS Madar, PJ Freda, P Bhandary, A Ghosh, N Matsumoto, ...
BioData Mining 17 (1), 1-37, 2024
2024
Using GPT-4 to write a scientific review article: a pilot evaluation study
ZP Wang, P Bhandary, Y Wang, JH Moore
bioRxiv, 2024.04. 13.589376, 2024
2024
Employing Predictive Techniques and Expression Based Information to Functionally Characterize Orphan Genes in Arabidopsis Thaliana
P Bhandary
Iowa State University, 2022
2022
FINDER: A fully automated pipeline to FIND accurate gene structures from proteins and RNA-Seq expression data
S Banerjee, M Woodhouse, RP Wise, P Bhandary, TZ Sen, C Andorf
Proceedings of the 11th ACM International Conference on Bioinformatics …, 2020
2020
Targets of Opportunity: The Birth of Orphan Genes, Exemplified in Yeast, Arabidopsis, Maize and Humans
ES Wurtele, U Singh, P Bhandary, J Li, AS Seetharam
Plant and Animal Genome XXVIII Conference (January 11-15, 2020), 2020
2020
fagin: synteny-based phylostratigraphy and finer classification of young genes
A Seetharam, Z Arendsee, J Li, U Singh, E Wurtele, P Bhandary
2019
Raising orphans from a metadata morass: a researcher's guide to re-use of public’omics data
E Wurtele, A Seetharam, Z Arendsee, M Hur
2017
Supplementary document
S Banerjee, P Bhandary, M Woodhouse, TZ Sen, RP Wise, C Andorf
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