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Alan O'Callaghan
Alan O'Callaghan
Verified email at ed.ac.uk - Homepage
Title
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Year
heatmaply: an R package for creating interactive cluster heatmaps for online publishing
T Galili, A O’Callaghan, J Sidi, C Sievert
Bioinformatics 34 (9), 1600-1602, 2018
4552018
A sensitive and affordable multiplex RT-qPCR assay for SARS-CoV-2 detection
MAM Reijns, L Thompson, JC Acosta, HA Black, FJ Sanchez-Luque, ...
PLoS biology 18 (12), e3001030, 2020
402020
Species-specific regulation of angiogenesis by glucocorticoids reveals contrasting effects on inflammatory and angiogenic pathways
R Morgan, J Keen, D Halligan, A O’Callaghan, R Andrew, D Livingstone, ...
PLoS One 13 (2), e0192746, 2018
142018
heatmaply: interactive cluster heat maps using ‘plotly’
T Galili, J Sidi, A O’Callaghan, Y Benjamini
R package version 0.11 1, 2017
122017
Transcriptional dynamics of colorectal cancer risk associated variation at 11q23. 1 correlate with tuft cell abundance and marker expression in silico
BT Harris, V Rajasekaran, JP Blackmur, A O’callaghan, K Donnelly, ...
Scientific Reports 12 (1), 13609, 2022
72022
Embracing heterogeneity in multi-donor scRNAseq data: scalable inference of multi-scale heterogenity
A O’Callaghan
The University of Edinburgh, 2022
2022
BASiCS workflow: a step-by-step analysis of expression variability using single cell RNA sequencing data
A O'Callaghan, N Eling, JC Marioni, CA Vallejos
F1000Research 11, 59, 2022
2022
A sensitive and affordable multiplex RT-qPCR assay for SARS-CoV-2 detection (preprint)
MAM Reijns, L Thompson, JC Acosta, HA Black, FJ Sanchez-Luque, ...
2020
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