| Multiple wheat genomes reveal global variation in modern breeding S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa, J Brinton, ... Nature 588 (7837), 277-283, 2020 | 588 | 2020 |
| The barley pan-genome reveals the hidden legacy of mutation breeding M Jayakodi, S Padmarasu, G Haberer, VS Bonthala, H Gundlach, ... Nature 588 (7837), 284-289, 2020 | 370 | 2020 |
| TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools C Monat, S Padmarasu, T Lux, T Wicker, H Gundlach, A Himmelbach, ... Genome biology 20, 1-18, 2019 | 202 | 2019 |
| The rise and fall of African rice cultivation revealed by analysis of 246 new genomes P Cubry, C Tranchant-Dubreuil, AC Thuillet, C Monat, MN Ndjiondjop, ... Current Biology 28 (14), 2274-2282. e6, 2018 | 95 | 2018 |
| The Aegilops ventricosa 2NvS segment in bread wheat: cytology, genomics and breeding L Gao, DH Koo, P Juliana, T Rife, D Singh, C Lemes da Silva, T Lux, ... Theoretical and Applied Genetics 134 (2), 529-542, 2021 | 50 | 2021 |
| Prospects of pan-genomics in barley C Monat, M Schreiber, N Stein, M Mascher Theoretical and Applied Genetics, 2018 | 48 | 2018 |
| TOGGLE: toolbox for generic NGS analyses C Monat, C Tranchant-Dubreuil, A Kougbeadjo, C Farcy, ... BMC bioinformatics 16, 1-8, 2015 | 30 | 2015 |
| Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding JM Aury, S Engelen, B Istace, C Monat, P Lasserre-Zuber, C Belser, ... GigaScience 11, giac034, 2022 | 29 | 2022 |
| Wheat Panache: A pangenome graph database representing presence–absence variation across sixteen bread wheat genomes PE Bayer, J Petereit, É Durant, C Monat, M Rouard, H Hu, B Chapman, ... The Plant Genome 15 (3), e20221, 2022 | 25 | 2022 |
| de novo assemblies of three Oryza glaberrima accessions provide first insights about pan-genome of African rices C Monat, B Pera, MN Ndjiondjop, M Sow, C Tranchant-Dubreuil, ... Genome Biology and Evolution, evw253, 2016 | 24 | 2016 |
| De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East … KK Shimizu, D Copetti, M Okada, T Wicker, T Tameshige, M Hatakeyama, ... Plant and Cell Physiology 62 (1), 8-27, 2021 | 20 | 2021 |
| The South Green portal: A comprehensive resource for tropical and Mediterranean crop genomics V Guignon, Y Hueber, M Rouard, S Bocs, D Couvin, F De Lamotte, G Droc, ... Current Plant Biology 7, 6-9, 2016 | 19 | 2016 |
| LTRclassifier: A website for fast structural LTR retrotransposons classification in plants C Monat, N Tando, C Tranchant-Dubreuil, F Sabot Mobile Genetic Elements 6 (6), e1241050, 2016 | 18 | 2016 |
| TOGGLe, a flexible framework for easily building complex workflows and performing robust large-scale NGS analyses C Tranchant-Dubreuil, S Ravel, C Monat, G Sarah, A Diallo, L Helou, ... bioRxiv, 245480, 2018 | 11 | 2018 |
| DuplicationDetector, a light weight tool for duplication detection using NGS data G Djedatin, C Monat, S Engelen, F Sabot Current Plant Biology 9, 23-28, 2017 | 11 | 2017 |
| Comparison of two African rice species through a new pan-genomic approach on massive data C Monat, C Tranchant-Dubreuil, S Engelen, K Labadie, E Paradis, ... bioRxiv, 245431, 2018 | 4 | 2018 |
| Pangenomics in Crop Plants C Monat, F Sabot | 2 | 2020 |
| Pan-génome du riz africain cultivé Oryza glaberrima et son ancêtre sauvage Oryza barthii C Monat Montpellier, 2016 | 1 | 2016 |
| Wheat Panache-a pangenome graph database representing presence/absence variation across 16 bread wheat genomes PE Bayer, J Petereit, É Durant, C Monat, M Rouard, H Hu, B Chapman, ... bioRxiv, 2022 | | 2022 |
| The Rise and Fall of African Rice Cultivation History Revealed by Extensive Genome-Resequencing and Population Genomics Modeling Approaches P Cubry, C Tranchant-Dubreuil, AC Thuillet, C Monat, MN Ndjiondjop, ... Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | | 2019 |
Francois SabotDIADE, IRD CIRAD UMVerified email at ird.fr
