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Andrew D. McNaughton
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Quantum mechanical methods predict accurate thermodynamics of biochemical reactions
RP Joshi, A McNaughton, DG Thomas, CS Henry, SR Canon, LA McCue, ...
ACS omega 6 (14), 9948-9959, 2021
122021
Machine Learning Models for Predicting Molecular UV–Vis Spectra with Quantum Mechanical Properties
AD McNaughton, RP Joshi, CR Knutson, A Fnu, KJ Luebke, JP Malerich, ...
Journal of Chemical Information and Modeling 63 (5), 1462-1471, 2023
112023
De novo design of protein target specific scaffold-based Inhibitors via Reinforcement Learning
AD McNaughton, MS Bontha, CR Knutson, JA Pope, N Kumar
arXiv preprint arXiv:2205.10473, 2022
92022
Bayesian Inference for Integrating Yarrowia lipolytica Multiomics Datasets with Metabolic Modeling
AD McNaughton, EL Bredeweg, J Manzer, J Zucker, N Munoz Munoz, ...
ACS Synthetic Biology 10 (11), 2968-2981, 2021
72021
The first radio spectrum of a rapidly rotating A-type star
JA White, F Tapia-Vázquez, AG Hughes, A Moór, B Matthews, D Wilner, ...
The Astrophysical Journal Letters 912 (1), L5, 2021
32021
Leveraging Artificial Intelligence to Expedite Antibody Design and Enhance Antibody–Antigen Interactions
DN Kim, AD McNaughton, N Kumar
Bioengineering 11 (2), 185, 2024
22024
High-throughput native mass spectrometry as experimental validation for in silico drug design
M Zhou, KJ Schultz, JW Wilson, A Kruel, SM Thibert, CC Bracken, ...
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States), 2022
12022
CACTUS: Chemistry Agent Connecting Tool-Usage to Science
AD McNaughton, G Ramalaxmi, A Kruel, CR Knutson, RA Varikoti, ...
arXiv preprint arXiv:2405.00972, 2024
2024
SoDA-PAL Protein Profiling Proteomics of Sorgoleone Catabolizing Microbial Isolate Acinetobacter pittii SO1
LN Anderson, E Van Fossen, AD Mcnaughton, RG Egbert
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States), 2024
2024
Drug discovery via reinforcement learning with three-dimensional modeling
N Kumar, MVS Bontha, AD McNaughton, CR Knutson, JA Pope
US Patent App. 18/370,814, 2024
2024
Data-Driven Modeling and Analysis of Fatty Acid Desaturase in Plants
AD McNaughton, J Shanklin, S Raugei, N Kumar
bioRxiv, 2023.08. 17.553759, 2023
2023
Profiling sorghum-microbe interactions with a specialized photoaffinity probe identifies key sorgoleone binders in Acinetobacter pittii
JO Kroll, EM Van Fossen, LN Anderson, AD McNaughton, D Herrera, ...
bioRxiv, 2023.05. 31.542302, 2023
2023
Scaffold-Based Multi-Objective Drug Candidate Optimization
A Kruel, AD McNaughton, N Kumar
arXiv preprint arXiv:2301.07175, 2022
2022
De novo design of protein target specific scaffold-based Inhibitors via Reinforcement Learning
M Bontha, A McNaughton, C Knutson, J Pope, N Kumar
2021
Modeling Altair's Atmosphere
F Tapia-vazquez, J White, AG Hughes, A Moór, B Matthews, D Wilner, ...
American Astronomical Society Meeting Abstracts 53 (6), 208.08, 2021
2021
Stars Are Hard: how unconstrained stellar emission is interfering with debris disk studies
J White, F Tapia-vazquez, A Hughes, A Moor, B Matthews, D Wilner, ...
American Astronomical Society Meeting Abstracts 53 (6), 308.04, 2021
2021
Gyrochronology of Wide Binaries in the Kepler K2
A Stone-Martinez, G Villarroel, P Majewski, T Otani, T Oswalt, ...
American Astronomical Society Meeting Abstracts# 231 231, 450.08, 2018
2018
Gyrochronology of Wide Binaries in the Kepler K2 Fields
A Stone-Martinez, G Villarroel, P Majewski, T Otani, T Oswalt, ...
2017
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