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Batuhan Kav
Batuhan Kav
ariadne.ai
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Title
Cited by
Cited by
Year
Different force fields give rise to different amyloid aggregation pathways in molecular dynamics simulations
S Samantray, F Yin, B Kav, B Strodel
Journal of chemical information and modeling 60 (12), 6462-6475, 2020
792020
Disorder-to-order transition of the amyloid-β peptide upon lipid binding
H Fatafta, B Kav, BF Bundschuh, J Loschwitz, B Strodel
Biophysical chemistry 280, 106700, 2022
622022
Headgroup structure and cation binding in phosphatidylserine lipid bilayers
H Antila, P Buslaev, F Favela-Rosales, TM Ferreira, I Gushchin, ...
The Journal of Physical Chemistry B 123 (43), 9066-9079, 2019
522019
Force generation by the growth of amyloid aggregates
TW Herling, GA Garcia, TCT Michaels, W Grentz, J Dean, U Shimanovich, ...
Proceedings of the National Academy of Sciences 112 (31), 9524-9529, 2015
312015
Emerging era of biomolecular membrane simulations: automated physically-justified force field development and quality-evaluated databanks
HS Antila, B Kav, MS Miettinen, H Martinez-Seara, P Jungwirth, ...
The Journal of Physical Chemistry B 126 (23), 4169-4183, 2022
142022
Weak carbohydrate–carbohydrate interactions in membrane adhesion are fuzzy and generic
B Kav, A Grafmüller, E Schneck, TR Weikl
Nanoscale 12 (33), 17342-17353, 2020
92020
Binding and segregation of proteins in membrane adhesion: theory, modeling, and simulations
TR Weikl, J Hu, B Kav, B Różycki
Advances in Biomembranes and Lipid Self-Assembly 30, 159-194, 2019
72019
NMRlipids Databank makes data-driven analysis of biomembrane properties accessible for all
A Kiirikki, H Antila, L Bort, P Buslaev, F Fernando, TM Ferreira, P Fuchs, ...
52023
Probing the link between pancratistatin and mitochondrial apoptosis through changes in the membrane dynamics on the nanoscale
SR Castillo, BW Rickeard, M DiPasquale, MHL Nguyen, A Lewis-Laurent, ...
Molecular pharmaceutics 19 (6), 1839-1852, 2022
52022
Does the inclusion of electronic polarisability lead to a better modelling of peptide aggregation?
B Kav, B Strodel
RSC advances 12 (32), 20829-20837, 2022
42022
Interplay of Trans- and Cis-Interactions of Glycolipids in Membrane Adhesion
B Kav, B Demé, C Gege, M Tanaka, E Schneck, TR Weikl
Frontiers in molecular biosciences 8, 754654, 2021
42021
Overlay databank unlocks data-driven analyses of biomolecules for all
AM Kiirikki, HS Antila, LS Bort, P Buslaev, F Favela-Rosales, TM Ferreira, ...
Nature Communications 15 (1), 1136, 2024
32024
Function changing mutations in glucocorticoid receptor evolution correlate with their relevance to mode coupling
B Kav, M Öztürk, A Kabakçιoğlu
Proteins: Structure, Function, and Bioinformatics 84 (5), 655-665, 2016
32016
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A β 16− 22
E Smorodina, B Kav, H Fatafta, B Strodel
Proteins: Struct., Funct., Bioinf, 1-14, 2023
22023
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A β 16− 22 β _ 16-22
E Smorodina, B Kav, H Fatafta, B Strodel
Proteins: Structure, Function, and Bioinformatics, 2023
12023
A brief history of amyloid aggregation simulations
H Fatafta, M Khaled, B Kav, OO Olubiyi, B Strodel
Wiley Interdisciplinary Reviews: Computational Molecular Science 14 (1), e1703, 2024
2024
Evaluating polarizable biomembrane simulations against experiments
HS Antila, S Dixit, B Kav, JJ Madsen, MS Miettinen, OHS Ollila
bioRxiv, 2023.12. 01.569661, 2023
2023
NMRlipids Databank makes data-driven analysis of biomembrane properties accessible for all
S Ollila, A Kiirikki, H Antila, L Bort, P Buslaev, F Favela-Rosales, ...
2023
Measuring pico-Newton Forces with Lipid Anchors as Force Sensors in Molecular Dynamics Simulations
B Kav, TR Weikl, E Schneck
The Journal of Physical Chemistry B 127 (18), 4081-4089, 2023
2023
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide A [Formula: see text]
E Smorodina, B Kav, H Fatafta, B Strodel
Proteins, 0
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Articles 1–20