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Ibrahim F Farag
Ibrahim F Farag
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Cited by
Year
Clades of huge phages from across Earth’s ecosystems
B Al-Shayeb, R Sachdeva, LX Chen, F Ward, P Munk, A Devoto, ...
Nature 578 (7795), 425-431, 2020
3942020
Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems
C He, R Keren, ML Whittaker, IF Farag, JA Doudna, JHD Cate, JF Banfield
Nature microbiology 6 (3), 354-365, 2021
1142021
In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3)
NH Youssef, IF Farag, C Rinke, SJ Hallam, T Woyke, MS Elshahed
PloS one 10 (6), e0127499, 2015
1112015
Global distribution patterns and pangenomic diversity of the candidate phylum “Latescibacteria”(WS3)
IF Farag, NH Youssef, MS Elshahed
Applied and Environmental Microbiology 83 (10), e00521-17, 2017
992017
Global patterns of abundance, diversity and community structure of the Aminicenantes (candidate phylum OP8)
IF Farag, JP Davis, NH Youssef, MS Elshahed
PloS one 9 (3), e92139, 2014
992014
Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum ‘Diapherotrites’
NH Youssef, C Rinke, R Stepanauskas, I Farag, T Woyke, MS Elshahed
The ISME journal 9 (2), 447-460, 2015
862015
Horizontal gene transfer as an indispensable driver for Neocallimastigomycota evolution into a distinct gut-dwelling fungal lineage
MSE Chelsea L. Murphy, Noha H. Youssef, Radwa A. Hanafy, M. B. Couger, Jason ...
Appl. Environ. Microbiol., 2019
77*2019
Groundwater Elusimicrobia are metabolically diverse compared to gut microbiome Elusimicrobia and some have a novel nitrogenase paralog
R Méheust, CJ Castelle, PB Matheus Carnevali, IF Farag, C He, LX Chen, ...
The ISME journal 14 (12), 2907-2922, 2020
592020
Metabolic potentials of archaeal lineages resolved from metagenomes of deep Costa Rica sediments
IF Farag, JF Biddle, R Zhao, AJ Martino, CH House, RI León-Zayas
The ISME journal 14 (6), 1345-1358, 2020
422020
The Wood–Ljungdahl pathway as a key component of metabolic versatility in candidate phylum Bipolaricaulota (Acetothermia, OP1)
NH Youssef, IF Farag, S Rudy, A Mulliner, K Walker, F Caldwell, M Miller, ...
Environmental microbiology reports 11 (4), 538-547, 2019
392019
Sifarchaeota,” a Novel Asgard Phylum from Costa Rican Sediment Capable of Polysaccharide Degradation and Anaerobic Methylotrophy
IF Farag, R Zhao, JF Biddle
Applied and Environmental Microbiology 87 (9), e02584-20, 2021
302021
Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in candidate phyla radiation bacteria
AL Jaffe, AD Thomas, C He, R Keren, LE Valentin-Alvarado, P Munk, ...
MBio 12 (4), 10.1128/mbio. 00521-21, 2021
252021
Candidatus Krumholzibacterium zodletonense gen. nov., sp nov, the first representative of the candidate phylum Krumholzibacteriota phyl. nov. recovered from an anoxic sulfidic …
NH Youssef, IF Farag, CR Hahn, H Premathilake, E Fry, M Hart, ...
Systematic and applied microbiology 42 (1), 85-93, 2019
222019
Microbial diversity and sulfur cycling in an early earth analogue: from ancient novelty to modern commonality
CR Hahn, IF Farag, CL Murphy, M Podar, MS Elshahed, NH Youssef
MBio 13 (2), e00016-22, 2022
202022
Genomic characterization of candidate division LCP-89 reveals an atypical cell wall structure, microcompartment production, and dual respiratory and fermentative capacities
NH Youssef, IF Farag, CR Hahn, J Jarett, E Becraft, E Eloe-Fadrosh, ...
Applied and environmental microbiology 85 (10), e00110-19, 2019
172019
Occurrence, Diversity, and Genomes of “Candidatus Patescibacteria” along the Early Diagenesis of Marine Sediments
R Zhao, IF Farag, SL Jørgensen, JF Biddle
Applied and Environmental Microbiology 88 (24), e01409-22, 2022
62022
Expanding the repertoire of electron acceptors for the anaerobic oxidation of methane in carbonates in the Atlantic and Pacific Ocean
S Beckmann, IF Farag, R Zhao, GD Christman, NG Prouty, JF Biddle
The ISME Journal 15 (9), 2523-2536, 2021
62021
Candidatus Mcinerneyibacterium aminivorans gen. nov., sp. nov., the first representative of the candidate phylum Mcinerneyibacteriota phyl. nov. recovered from a high …
A Yadav, J Vilcáez, IF Farag, B Johnson, K Mueller, NH Youssef, ...
Systematic and applied microbiology 43 (2), 126057, 2020
42020
Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in CPR bacteria
AL Jaffe, C He, R Keren, LE Valentin-Alvarado, P Munk, ...
bioRxiv, 2021.03. 03.433784, 2021
32021
Evidence for an expanded repertoire of electron acceptors for the anaerobic oxidation of methane in authigenic carbonates in the Atlantic and Pacific Ocean
S Beckmann, IF Farag, R Zhao, GD Christman, NG Prouty, JF Biddle
bioRxiv, 2020.06. 12.148429, 2020
32020
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