| Discordant bioinformatic predictions of antimicrobial resistance from whole-genome sequencing data of bacterial isolates: an inter-laboratory study RM Doyle, DM O'sullivan, SD Aller, S Bruchmann, T Clark, ... Microbial genomics 6 (2), e000335, 2020 | 97 | 2020 |
| Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species HR Ansari, TJ Templeton, AK Subudhi, A Ramaprasad, J Tang, F Lu, ... International journal for parasitology 46 (11), 685-696, 2016 | 93 | 2016 |
| Modest heterologous protection after Plasmodium falciparum sporozoite immunization: a double-blind randomized controlled clinical trial J Walk, IJ Reuling, MC Behet, L Meerstein-Kessel, W Graumans, ... BMC medicine 15, 1-12, 2017 | 91 | 2017 |
| Enrichment of clinically relevant organisms in spontaneous preterm-delivered placentas and reagent contamination across all clinical groups in a large pregnancy cohort in the … LJ Leon, R Doyle, E Diez-Benavente, TG Clark, N Klein, P Stanier, ... Applied and environmental microbiology 84 (14), e00483-18, 2018 | 80 | 2018 |
| Rapid and iterative genome editing in the malaria parasite Plasmodium knowlesi provides new tools for P. vivax research F Mohring, MN Hart, TA Rawlinson, R Henrici, JA Charleston, ... Elife 8, e45829, 2019 | 77 | 2019 |
| Know Your Heart: Rationale, design and conduct of a cross-sectional study of cardiovascular structure, function and risk factors in 4500 men and women aged 35-69 years from two … S Cook, S Malyutina, AV Kudryavtsev, M Averina, N Bobrova, S Boytsov, ... Wellcome open research 3, 2018 | 76 | 2018 |
| Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics S Auburn, ED Benavente, O Miotto, RD Pearson, R Amato, MJ Grigg, ... Nature communications 9 (1), 2585, 2018 | 65 | 2018 |
| Machine Learning Predicts Accurately Mycobacterium tuberculosis Drug Resistance From Whole Genome Sequencing Data W Deelder, S Christakoudi, J Phelan, ED Benavente, S Campino, ... Frontiers in genetics 10, 922, 2019 | 60 | 2019 |
| Global analysis of Plasmodium falciparum histidine-rich protein-2 (pfhrp2) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis N Sepúlveda, J Phelan, E Diez-Benavente, S Campino, TG Clark, ... Infection, genetics and evolution 62, 211-219, 2018 | 50 | 2018 |
| Genomic variation in Plasmodium vivax malaria reveals regions under selective pressure E Diez Benavente, Z Ward, W Chan, FR Mohareb, CJ Sutherland, ... PloS one 12 (5), e0177134, 2017 | 44 | 2017 |
| Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi M Ravenhall, ED Benavente, M Mipando, ATR Jensen, CJ Sutherland, ... Malaria journal 15, 1-11, 2016 | 41 | 2016 |
| External validation of a deep learning electrocardiogram algorithm to detect ventricular dysfunction IZ Attia, AS Tseng, ED Benavente, JR Medina-Inojosa, TG Clark, ... International journal of cardiology 329, 130-135, 2021 | 40 | 2021 |
| Global genetic diversity of var2csa in Plasmodium falciparum with implications for malaria in pregnancy and vaccine development ED Benavente, DR Oresegun, PF de Sessions, EM Walker, C Roper, ... Scientific Reports 8 (1), 15429, 2018 | 40 | 2018 |
| Distinctive genetic structure and selection patterns in Plasmodium vivax from South Asia and East Africa ED Benavente, E Manko, J Phelan, M Campos, D Nolder, D Fernandez, ... Nature communications 12 (1), 3160, 2021 | 38 | 2021 |
| Artemisinin resistance-associated markers in Plasmodium falciparum parasites from the China-Myanmar border: predicted structural stability of K13 propeller … Y He, S Campino, E Diez Benavente, DC Warhurst, KB Beshir, I Lubis, ... PLoS One 14 (3), e0213686, 2019 | 30 | 2019 |
| Whole genome sequencing of amplified Plasmodium knowlesi DNA from unprocessed blood reveals genetic exchange events between Malaysian Peninsular and … ED Benavente, AR Gomes, JR De Silva, M Grigg, H Walker, BE Barber, ... Scientific reports 9 (1), 9873, 2019 | 29 | 2019 |
| An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities DM O’Sullivan, RM Doyle, S Temisak, N Redshaw, AS Whale, G Logan, ... Scientific Reports 11 (1), 10590, 2021 | 27 | 2021 |
| A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria E Diez Benavente, M Campos, J Phelan, D Nolder, JG Dombrowski, ... PLoS genetics 16 (2), e1008576, 2020 | 27 | 2020 |
| PhyTB: Phylogenetic tree visualisation and sample positioning for M. tuberculosis ED Benavente, F Coll, N Furnham, R McNerney, JR Glynn, S Campino, ... BMC bioinformatics 16, 1-5, 2015 | 26 | 2015 |
| Using deep learning to identify recent positive selection in malaria parasite sequence data W Deelder, ED Benavente, J Phelan, E Manko, S Campino, L Palla, ... Malaria journal 20 (1), 270, 2021 | 24 | 2021 |
Jody PhelanLSHTMVerified email at lshtm.ac.uk
Jody PhelanLSHTMVerified email at lshtm.ac.uk